Michael McKain
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Year
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
A D’hont, F Denoeud, JM Aury, FC Baurens, F Carreel, O Garsmeur, ...
Nature 488 (7410), 213-217, 2012
9122012
One thousand plant transcriptomes and the phylogenomics of green plants
JH Leebens-Mack, MS Barker, EJ Carpenter, MK Deyholos, ...
3702019
The pineapple genome and the evolution of CAM photosynthesis
R Ming, R VanBuren, CM Wai, H Tang, MC Schatz, JE Bowers, E Lyons, ...
Nature genetics 47 (12), 1435-1442, 2015
3382015
A genome triplication associated with early diversification of the core eudicots
Y Jiao, J Leebens-Mack, S Ayyampalayam, JE Bowers, MR McKain, ...
Genome biology 13 (1), 1-14, 2012
2792012
Assembling the tree of the monocotyledons: plastome sequence phylogeny and evolution of Poales1
TJ Givnish, M Ames, JR McNeal, MR McKain, PR Steele, ...
Annals of the Missouri Botanical Garden 97 (4), 584-616, 2010
2242010
Origin and evolution of the octoploid strawberry genome
PP Edger, TJ Poorten, R VanBuren, MA Hardigan, M Colle, MR McKain, ...
Nature genetics 51 (3), 541-547, 2019
1962019
Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
SB Cannon, MR McKain, A Harkess, MN Nelson, S Dash, MK Deyholos, ...
Molecular biology and evolution 32 (1), 193-210, 2015
1812015
Allopolyploidy, diversification, and the Miocene grassland expansion
MC Estep, MR McKain, DV Diaz, J Zhong, JG Hodge, TR Hodkinson, ...
Proceedings of the National Academy of Sciences 111 (42), 15149-15154, 2014
1432014
The asparagus genome sheds light on the origin and evolution of a young Y chromosome
A Harkess, J Zhou, C Xu, JE Bowers, R Van der Hulst, S Ayyampalayam, ...
Nature communications 8 (1), 1-10, 2017
1242017
Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity
PP Edger, R VanBuren, M Colle, TJ Poorten, CM Wai, CE Niederhuth, ...
Gigascience 7 (2), gix124, 2018
1172018
Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
PP Edger, R Smith, MR McKain, AM Cooley, M Vallejo-Marin, Y Yuan, ...
The Plant Cell 29 (9), 2150-2167, 2017
1132017
Quality and quantity of data recovered from massively parallel sequencing: examples in Asparagales and Poaceae
PR Steele, KL Hertweck, D Mayfield, MR McKain, J Leebens‐Mack, ...
American Journal of Botany 99 (2), 330-348, 2012
1062012
A phylogenomic assessment of ancient polyploidy and genome evolution across the Poales
MR McKain, H Tang, JR McNeal, S Ayyampalayam, JI Davis, ...
Genome biology and evolution 8 (4), 1150-1164, 2016
822016
Phylogenomic analysis of transcriptome data elucidates co‐occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae)
MR McKain, N Wickett, Y Zhang, S Ayyampalayam, WR McCombie, ...
American journal of botany 99 (2), 397-406, 2012
782012
Diversification times among Brassica (Brassicaceae) crops suggest hybrid formation after 20 million years of divergence
T Arias, MA Beilstein, M Tang, MR McKain, JC Pires
American journal of botany 101 (1), 86-91, 2014
742014
Practical considerations for plant phylogenomics
MR McKain, MG Johnson, S Uribe‐Convers, D Eaton, Y Yang
Applications in plant sciences 6 (3), e1038, 2018
682018
Optimization of genotyping by sequencing (GBS) data in common bean (Phaseolus vulgaris L.)
S Schröder, S Mamidi, R Lee, MR McKain, PE McClean, JM Osorno
Molecular Breeding 36 (1), 6, 2016
552016
Evolution of a CAM anatomy predates the origins of Crassulacean acid metabolism in the Agavoideae (Asparagaceae)
K Heyduk, MR McKain, F Lalani, J Leebens-Mack
Molecular phylogenetics and evolution 105, 102-113, 2016
512016
Single Nucleotide Polymorphism–based Genetic Diversity in the Reference Set of Peanut (Arachis spp.) by Developing and Applying Cost‐Effective Kompetitive …
P Khera, HD Upadhyaya, MK Pandey, M Roorkiwal, M Sriswathi, P Janila, ...
The plant genome 6 (3), plantgenome2013.06.0019, 2013
512013
Verdant: automated annotation, alignment and phylogenetic analysis of whole chloroplast genomes
MR McKain, RH Hartsock, MM Wohl, EA Kellogg
Bioinformatics 33 (1), 130-132, 2017
462017
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