| PeaksPTM: mass spectrometry-based identification of peptides with unspecified modifications X Han, L He, L Xin, B Shan, B Ma Journal of proteome research 10 (7), 2930-2936, 2011 | 101 | 2011 |
| Extracting accurate precursor information for tandem mass spectra by RawConverter L He, J Diedrich, YY Chu, JR Yates III Analytical chemistry 87 (22), 11361-11367, 2015 | 99 | 2015 |
| Global site-specific N-glycosylation analysis of HIV envelope glycoprotein L Cao, JK Diedrich, DW Kulp, M Pauthner, L He, SKR Park, D Sok, CY Su, ... Nature communications 8, 14954, 2017 | 78 | 2017 |
| GlycoMaster DB: software to assist the automated identification of N-linked glycopeptides by tandem mass spectrometry L He, L Xin, B Shan, GA Lajoie, B Ma Journal of proteome research 13 (9), 3881-3895, 2014 | 64 | 2014 |
| A combinatorial approach to the peptide feature matching problem for label-free quantification H Lin, L He, B Ma Bioinformatics 29 (14), 1768-1775, 2013 | 38 | 2013 |
| Complete De Novo Assembly of Monoclonal Antibody Sequences NH Tran, MZ Rahman, L He, L Xin, B Shan, M Li Scientific reports 6, 31730, 2016 | 35 | 2016 |
| ADEPTS: advanced peptide de novo sequencing with a pair of tandem mass spectra L He, B Ma Journal of bioinformatics and computational biology 8 (06), 981-994, 2010 | 31 | 2010 |
| Expanding proteome coverage with CHarge Ordered Parallel Ion aNalysis (CHOPIN) combined with broad specificity proteolysis S Davis, PD Charles, L He, P Mowlds, BM Kessler, R Fischer Journal of proteome research 16 (3), 1288-1299, 2017 | 29 | 2017 |
| Chemoproteomic profiling and discovery of protein electrophiles in human cells ML Matthews, L He, BD Horning, EJ Olson, BE Correia, JR Yates III, ... Nature chemistry 9 (3), 234, 2017 | 22 | 2017 |
| Differential processing of HIV envelope glycans on the virus and soluble recombinant trimer L Cao, M Pauthner, R Andrabi, K Rantalainen, Z Berndsen, JK Diedrich, ... Nature communications 9 (1), 3693, 2018 | 18 | 2018 |
| From raw data to biological discoveries: a computational analysis pipeline for mass spectrometry-based proteomics M Lavallée-Adam, SKR Park, S Martínez-Bartolomé, L He, JR Yates Journal of The American Society for Mass Spectrometry 26 (11), 1820-1826, 2015 | 11 | 2015 |
| DE NOVO SEQUENCING WITH LIMITED NUMBER OF POST-TRANSLATIONAL MODIFICATIONS PER PEPTIDE L He, X Han, B Ma Journal of bioinformatics and computational biology 11 (04), 1350007, 2013 | 9 | 2013 |
| Fingerprinting protein structures effectively and efficiently X Cui, SC Li, L He, M Li Bioinformatics 30 (7), 949-955, 2013 | 7 | 2013 |
| Anionic polymers of acrylic and/or methacrylic acids and maleic esters, and salts thereof, and their use as cement/concrete additives R Valls, J Tuduri, RP Subirana US Patent 6,939,935, 2005 | 4 | 2005 |
| Applying application level gateways for real-time service Z Dongping, Z Deyun, H Lin Information Technology Journal 5 (6), 1088-1092, 2006 | 1 | 2006 |
| Quantitative In Vivo Proteomics of Metformin Response in Liver Reveals AMPK-Dependent and-Independent Signaling Networks BD Stein, D Calzolari, K Hellberg, YS Hu, L He, CM Hung, EQ Toyama, ... Cell Reports 29 (10), 3331-3348. e7, 2019 | | 2019 |
| HIV glycosylation L Cao, J Diedrich, M Pauthner, R Andrabi, K Rantalainen, Z Berndsen, ... ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018 | | 2018 |
| Monoclonal Antibody (mAb) Characterization Using PEAKS–Data Analysis Overview L He, B Shan | | 2015 |
| Algorithms for Characterizing Peptides and Glycopeptides with Mass Spectrometry L He University of Waterloo, 2013 | | 2013 |
| Towards the Comprehensive Mass Spectrometry-based Biopharmaceutical Analysis using PEAKS MAPS L He, Y Liu, W Sun, D Wang, W Zhang, T Yang, B Shan | | |
Bin MaProfessor of Computer Science, University of WaterlooVerified email at uwaterloo.ca
