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Hidenori Nishihara
Hidenori Nishihara
Kindai University
Verified email at nara.kindai.ac.jp
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Cited by
Year
The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
9942014
Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions
H Nishihara, M Hasegawa, N Okada
Proceedings of the National Academy of Sciences 103 (26), 9929-9934, 2006
2742006
Functional noncoding sequences derived from SINEs in the mammalian genome
H Nishihara, AFA Smit, N Okada
Genome research 16 (7), 864-874, 2006
2682006
Possible involvement of SINEs in mammalian-specific brain formation
T Sasaki, H Nishihara, M Hirakawa, K Fujimura, M Tanaka, N Kokubo, ...
Proceedings of the National Academy of Sciences 105 (11), 4220-4225, 2008
2112008
Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals
H Nishihara, S Maruyama, N Okada
Proceedings of the National Academy of Sciences 106 (13), 5235-5240, 2009
1962009
B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes
K Yoshida, Y Terai, S Mizoiri, M Aibara, H Nishihara, M Watanabe, ...
PLoS genetics 7 (8), e1002203, 2011
1612011
A retroposon analysis of Afrotherian phylogeny
H Nishihara, Y Satta, M Nikaido, JGM Thewissen, MJ Stanhope, N Okada
Molecular biology and evolution 22 (9), 1823-1833, 2005
1172005
Rooting the eutherian tree: the power and pitfalls of phylogenomics
H Nishihara, N Okada, M Hasegawa
Genome biology 8 (9), R199, 2007
1162007
Coelacanth genomes reveal signatures for evolutionary transition from water to land
M Nikaido, H Noguchi, H Nishihara, A Toyoda, Y Suzuki, R Kajitani, ...
Genome research 23 (10), 1740-1748, 2013
1122013
Ancient SINEs from African endemic mammals
M Nikaido, H Nishihara, Y Hukumoto, N Okada
Molecular Biology and Evolution 20 (4), 522-527, 2003
972003
Characterization of novel Alu-and tRNA-related SINEs from the tree shrew and evolutionary implications of their origins
H Nishihara, Y Terai, N Okada
Molecular biology and evolution 19 (11), 1964-1972, 2002
962002
A mammalian conserved element derived from SINE displays enhancer properties recapitulating Satb2 expression in early-born callosal projection neurons
K Tashiro, A Teissier, N Kobayashi, A Nakanishi, T Sasaki, K Yan, ...
PloS one 6 (12), e28497, 2011
602011
The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis
O Piskurek, H Nishihara, N Okada
Gene 441 (1-2), 111-118, 2009
502009
Coordinately co-opted multiple transposable elements constitute an enhancer for wnt5a expression in the mammalian secondary palate
H Nishihara, N Kobayashi, C Kimura-Yoshida, K Yan, O Bormuth, Q Ding, ...
PLoS Genetics 12 (10), e1006380, 2016
482016
Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis
Y Yuzawa, H Nishihara, T Haraguchi, S Masuda, M Shimojima, ...
DNA research 19 (1), 91-102, 2012
482012
Reverse evolution in RH1 for adaptation of cichlids to water depth in Lake Tanganyika
H Nagai, Y Terai, T Sugawara, H Imai, H Nishihara, M Hori, N Okada
Molecular biology and evolution 28 (6), 1769-1776, 2011
432011
A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8
A Nakanishi, N Kobayashi, A Suzuki-Hirano, H Nishihara, T Sasaki, ...
PloS one 7 (8), e43785, 2012
402012
Emergence of mammals by emergency: exaptation
N Okada, T Sasaki, T Shimogori, H Nishihara
Genes to Cells 15 (8), 801-812, 2010
392010
Transposable elements as genetic accelerators of evolution: contribution to genome size, gene regulatory network rewiring and morphological innovation
H Nishihara
Genes & Genetic Systems 94 (6), 269-281, 2019
372019
The complete mitochondrial genomes of deep-sea squid (Bathyteuthis abyssicola), bob-tail squid (Semirossia patagonica) and four giant cuttlefish (Sepia apama, S. latimanus, S …
Y Kawashima, H Nishihara, T Akasaki, M Nikaido, K Tsuchiya, S Segawa, ...
Molecular phylogenetics and evolution 69 (3), 980-993, 2013
372013
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