Sergey Kryazhimskiy
Sergey Kryazhimskiy
Associate Professor of Ecology, Behavior, and Evolution, UCSD
Verified email at - Homepage
Cited by
Cited by
The population genetics of dN/dS
S Kryazhimskiy, JB Plotkin
PLoS Genetics 4 (12), e1000304, 2008
Inexpensive multiplexed library preparation for megabase-sized genomes
M Baym, S Kryazhimskiy, TD Lieberman, H Chung, MM Desai, R Kishony
PLoS One 10 (5), e0128036, 2015
Global epistasis makes adaptation predictable despite sequence-level stochasticity
S Kryazhimskiy, DP Rice, ER Jerison, MM Desai
Science 344 (6191), 1519-1522, 2014
Prevalence of epistasis in the evolution of influenza A surface proteins
S Kryazhimskiy, J Dushoff, GA Bazykin, JB Plotkin
PLoS Genetics 7 (2), e1001301, 2011
Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates
S Roy, LH Vandenberghe, S Kryazhimskiy, R Grant, R Calcedo, X Yuan, ...
PLoS Pathogens 5 (7), e1000503, 2009
The dynamics of social networks among female Asian elephants
S de Silva, A Ranjeewa, S Kryazhimskiy
BMC ecology 11 (1), 17, 2011
The dynamics of adaptation on correlated fitness landscapes
S Kryazhimskiy, G Tkačik, JB Plotkin
Proceedings of the National Academy of Sciences 106 (44), 18638-18643, 2009
Loss and recovery of genetic diversity in adapting populations of HIV
PS Pennings, S Kryazhimskiy, J Wakeley
PLoS genetics 10 (1), e1004000, 2014
Identifying Signatures of Selection in Genetic Time Series
AF Feder, S Kryazhimskiy, JB Plotkin
Genetics 196 (2), 509--522, 2014
Young proteins experience more variable selection pressures than old proteins
A Vishnoi, S Kryazhimskiy, GA Bazykin, S Hannenhalli, JB Plotkin
Genome research 20 (11), 1574-1581, 2010
Coordinated Evolution of Influenza A Surface Proteins
AD Neverov, S Kryazhimskiy, JB Plotkin, GA Bazykin
PLoS Genetics 11, e1005404, 2015
On state-space reduction in multi-strain pathogen models, with an application to antigenic drift in influenza A
S Kryazhimskiy, U Dieckmann, SA Levin, J Dushoff
PLoS computational biology 3 (8), e159, 2007
Higher-fitness yeast genotypes are less robust to deleterious mutations
MS Johnson, A Martsul, S Kryazhimskiy, MM Desai
Science 366 (6464), 490-493, 2019
Genetic variation in adaptability and pleiotropy in budding yeast
ER Jerison, S Kryazhimskiy, JK Mitchell, JS Bloom, L Kruglyak, MM Desai
eLife 6, e27167, 2017
Population Subdivision and Adaptation in Asexual Populations of Saccharomyces cerevisiae
S Kryazhimskiy, DP Rice, MM Desai
Evolution, 2012
Modular epistasis and the compensatory evolution of gene deletion mutants
JI Rojas Echenique, S Kryazhimskiy, AN Nguyen Ba, MM Desai
PLoS genetics 15 (2), e1007958, 2019
Chance and necessity in the pleiotropic consequences of adaptation for budding yeast
ER Jerison, ANN Ba, MM Desai, S Kryazhimskiy
Nature Ecology & Evolution 4 (4), 601-611, 2020
Evolutionary stalling and a limit on the power of natural selection to improve a cellular module
S Venkataram, R Monasky, SH Sikaroodi, S Kryazhimskiy, B Kacar
Proceedings of the National Academy of Sciences 117 (31), 18582-18590, 2020
Natural selection for nucleotide usage at synonymous and nonsynonymous sites in influenza A virus genes
S Kryazhimskiy, GA Bazykin, J Dushoff
Journal of virology 82 (10), 4938, 2008
Directionality in the evolution of influenza A haemagglutinin
S Kryazhimskiy, GA Bazykin, J Plotkin, J Dushoff
Proceedings of the Royal Society B: Biological Sciences 275 (1650), 2455, 2008
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