Baochen Shi
Baochen Shi
Verified email at ucla.edu
TitleCited byYear
NPInter: the noncoding RNAs and protein related biomacromolecules interaction database
T Wu, J Wang, C Liu, Y Zhang, B Shi, X Zhu, Z Zhang, G SkogerbÝ, ...
Nucleic acids research 34 (suppl_1), D150-D152, 2006
822006
Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray
H He, J Wang, T Liu, XS Liu, T Li, Y Wang, Z Qian, H Zheng, X Zhu, T Wu, ...
Genome research 17 (10), 1471-1477, 2007
812007
Vitamin B12 modulates the transcriptome of the skin microbiota in acne pathogenesis
D Kang, B Shi, MC Erfe, N Craft, H Li
Science translational medicine 7 (293), 293ra103-293ra103, 2015
652015
Evolution and migration history of the Chinese population inferred from Chinese Y-chromosome evidence
W Deng, B Shi, X He, Z Zhang, J Xu, B Li, J Yang, L Ling, C Dai, B Qiang, ...
Journal of human genetics 49 (7), 339, 2004
612004
Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis
B Shi, M Chang, J Martin, M Mitreva, R Lux, P Klokkevold, E Sodergren, ...
MBio 6 (1), e01926-14, 2015
562015
Conservation analysis of small RNA genes in Escherichia coli
Y Zhang, Z Zhang, L Ling, B Shi, R Chen
Bioinformatics 20 (5), 599-603, 2004
482004
The balance of metagenomic elements shapes the skin microbiome in acne and health
E Barnard, B Shi, D Kang, N Craft, H Li
Scientific reports 6, 39491, 2016
472016
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis
Y Zhang, S Li, G SkogerbÝ, Z Zhang, X Zhu, Z Zhang, S Sun, H Lu, B Shi, ...
BMC bioinformatics 7 (1), 252, 2006
412006
The skin microbiome is different in pediatric versus adult atopic dermatitis
B Shi, NJ Bangayan, E Curd, PA Taylor, RL Gallo, DYM Leung, H Li
Journal of Allergy and Clinical Immunology 138 (4), 1233-1236, 2016
372016
Integrated analysis of multiple data sources reveals modular structure of biological networks
H Lu, B Shi, G Wu, Y Zhang, X Zhu, Z Zhang, C Liu, Y Zhao, T Wu, J Wang, ...
Biochemical and biophysical research communications 345 (1), 302-309, 2006
352006
Identifying Hfq-binding small RNA targets in Escherichia coli
Y Zhang, S Sun, T Wu, J Wang, C Liu, L Chen, X Zhu, Y Zhao, Z Zhang, ...
Biochemical and biophysical research communications 343 (3), 950-955, 2006
322006
Dynamic changes in subgraph preference profiles of crucial transcription factors
Z Zhang, C Liu, G SkogerbÝ, X Zhu, H Lu, L Chen, B Shi, Y Zhang, ...
PLoS computational biology 2 (5), e47, 2006
192006
Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites
B Shi, X Guo, T Wu, S Sheng, J Wang, G SkogerbÝ, X Zhu, R Chen
BMC genomics 10 (1), 92, 2009
132009
The discovery and progress of RNA interference: a brief introduction to the Nobel Prize in Physiology or Medicine 2006
T Wu, BC Shi, RS Chen
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS 33 (10), 915-917, 2006
12*2006
Methicillin-Resistant Staphylococcus aureus Colonization Is Associated with Decreased Skin Commensal Bacteria in Atopic Dermatitis.
B Shi, DYM Leung, PA Taylor, H Li
The Journal of investigative dermatology 138 (7), 1668-1671, 2018
10*2018
The denture-associated oral microbiome in health and stomatitis
B Shi, T Wu, J McLean, A Edlund, Y Young, X He, H Lv, X Zhou, W Shi, ...
mSphere 1 (6), e00215-16, 2016
102016
Predicting protein function based on modularized protein interaction network
HC Lu, QY Shi, BC Shi, ZH Zhang, Y Zhao, SQ Tang, L Xiong, Q Wang, ...
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS 33 (5), 446-451, 2006
7*2006
Genome-wide analysis of mammalian DNA segment fusion/fission
Z Zhang, H Sun, Y Zhang, Y Zhao, B Shi, S Sun, H Lu, D Bu, L Ling, ...
Journal of theoretical biology 240 (2), 200-208, 2006
62006
Anacapa Toolkit: an environmental DNA toolkit for processing multilocus metabarcode datasets
EE Curd, Z Gold, G Kandlikar, J Gomer, M Ogden, T O'Connell, L Pipes, ...
Methods in Ecology and Evolution, 2019
32019
A strategy for ordered sequencing based on single molecule nanomanipulation
M Lu, BC Shi, XL Li, JH Lu, RS Chen, J Hu
Progress in Biochemistry and Biophysics 33 (7), 660-664, 2006
32006
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Articles 1–20