| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 13837 | 2012 |
| A comparative encyclopedia of DNA elements in the mouse genome F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ... Nature 515 (7527), 355-364, 2014 | 1899 | 2014 |
| The UCSC Genome Browser database: extensions and updates 2013 LR Meyer, AS Zweig, AS Hinrichs, D Karolchik, RM Kuhn, M Wong, ... Nucleic acids research 41 (D1), D64-D69, 2012 | 900 | 2012 |
| ENCODE data in the UCSC Genome Browser: year 5 update KR Rosenbloom, CA Sloan, VS Malladi, TR Dreszer, K Learned, ... Nucleic acids research 41 (D1), D56-D63, 2012 | 881 | 2012 |
| ENCODE data at the ENCODE portal CA Sloan, ET Chan, JM Davidson, VS Malladi, JS Strattan, BC Hitz, ... Nucleic acids research 44 (D1), D726-D732, 2016 | 534 | 2016 |
| An encyclopedia of mouse DNA elements (Mouse ENCODE) JA Stamatoyannopoulos, M Snyder, R Hardison, B Ren, T Gingeras, ... Genome Biology 13 (8), 418, 2012 | 487 | 2012 |
| The UCSC Genome Browser database: extensions and updates 2011 TR Dreszer, D Karolchik, AS Zweig, AS Hinrichs, BJ Raney, RM Kuhn, ... Nucleic acids research 40 (D1), D918-D923, 2012 | 413 | 2012 |
| ENCODE whole-genome data in the UCSC Genome Browser: update 2012 KR Rosenbloom, TR Dreszer, JC Long, VS Malladi, CA Sloan, BJ Raney, ... Nucleic acids research 40 (D1), D912-D917, 2012 | 328 | 2012 |
| Principles of regulatory information conservation between mouse and human Y Cheng, Z Ma, BH Kim, W Wu, P Cayting, AP Boyle, V Sundaram, X Xing, ... Nature 515 (7527), 371-375, 2014 | 278 | 2014 |
| A cellular anatomy of the normal adult human prostate and prostatic urethra GH Henry, A Malewska, DB Joseph, VS Malladi, J Lee, J Torrealba, ... Cell reports 25 (12), 3530-3542. e5, 2018 | 263 | 2018 |
| ENCODE whole-genome data in the UCSC genome browser (2011 update) BJ Raney, MS Cline, KR Rosenbloom, TR Dreszer, K Learned, GP Barber, ... Nucleic acids research 39 (suppl_1), D871-D875, 2011 | 243 | 2011 |
| Activation of PARP-1 by snoRNAs controls ribosome biogenesis and cell growth via the RNA helicase DDX21 DS Kim, CV Camacho, A Nagari, VS Malladi, S Challa, WL Kraus Molecular cell 75 (6), 1270-1285. e14, 2019 | 184 | 2019 |
| Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis HL Franco, A Nagari, VS Malladi, W Li, Y Xi, D Richardson, KL Allton, ... Genome research 28 (2), 159-170, 2018 | 128 | 2018 |
| Suppression of myeloid cell arginase activity leads to therapeutic response in a NSCLC mouse model by activating anti-tumor immunity JJ Miret, P Kirschmeier, S Koyama, M Zhu, YY Li, Y Naito, M Wu, ... Journal for immunotherapy of cancer 7, 1-12, 2019 | 115 | 2019 |
| Loss of CHD1 promotes heterogeneous mechanisms of resistance to AR-targeted therapy via chromatin dysregulation Z Zhang, C Zhou, X Li, SD Barnes, S Deng, E Hoover, CC Chen, YS Lee, ... Cancer cell 37 (4), 584-598. e11, 2020 | 107 | 2020 |
| Cardiac reprogramming factors synergistically activate genome-wide cardiogenic stage-specific enhancers H Hashimoto, Z Wang, GA Garry, VS Malladi, GA Botten, W Ye, H Zhou, ... Cell Stem Cell 25 (1), 69-86. e5, 2019 | 86 | 2019 |
| Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation K Stefanius, K Servage, M de Souza Santos, HF Gray, JE Toombs, ... Elife 8, e40226, 2019 | 82 | 2019 |
| Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes Y Xi, J Shi, W Li, K Tanaka, KL Allton, D Richardson, J Li, HL Franco, ... BMC genomics 19, 1-11, 2018 | 79 | 2018 |
| Canine population data generated from a multiplex STR kit for use in forensic casework S Kanthaswamy, BK Tom, AM Mattila, E Johnston, M Dayton, J Kinaga, ... Journal of Forensic Sciences 54 (4), 829-840, 2009 | 66 | 2009 |
| Identification and characterization of an alternative cancer-derived PD-L1 splice variant NB Hassounah, VS Malladi, Y Huang, SS Freeman, EM Beauchamp, ... Cancer Immunology, Immunotherapy, 1-14, 2018 | 65 | 2018 |
Kate RosenbloomUC Santa Cruz Genomics Institute, UCSC Genome BrowserAdresse e-mail validée de soe.ucsc.edu
