Anders Riutta
Anders Riutta
Institute for Data Science and Biotechnology, Gladstone Institutes
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WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research
DN Slenter, M Kutmon, K Hanspers, A Riutta, J Windsor, N Nunes, ...
Nucleic acids research 46 (D1), D661-D667, 2018
WikiPathways: connecting communities
M Martens, A Ammar, A Riutta, A Waagmeester, DN Slenter, K Hanspers, ...
Nucleic acids research 49 (D1), D613-D621, 2021
WikiPathways: capturing the full diversity of pathway knowledge
M Kutmon, A Riutta, N Nunes, K Hanspers, EL Willighagen, A Bohler, ...
Nucleic acids research 44 (D1), D488-D494, 2016
exRNA atlas analysis reveals distinct extracellular RNA cargo types and their carriers present across human biofluids
OD Murillo, W Thistlethwaite, J Rozowsky, SL Subramanian, R Lucero, ...
Cell 177 (2), 463-477. e15, 2019
Wikidata as a knowledge graph for the life sciences
A Waagmeester, G Stupp, S Burgstaller-Muehlbacher, BM Good, M Griffith, ...
Elife 9, e52614, 2020
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
Using the semantic web for rapid integration of WikiPathways with other biological online data resources
A Waagmeester, M Kutmon, A Riutta, R Miller, EL Willighagen, CT Evelo, ...
PLoS computational biology 12 (6), e1004989, 2016
Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science
DR Unni, SAT Moxon, M Bada, M Brush, R Bruskiewich, JH Caufield, ...
Clinical and translational science 15 (8), 1848-1855, 2022
A Miller
M Martens, A Ammar, A Riutta, A Waagmeester, DN Slenter, K Hanspers
R., Digles, D., Lopes, EN, Ehrhart, F., et al, 2021
Pathway information extracted from 25 years of pathway figures
K Hanspers, A Riutta, M Summer-Kutmon, AR Pico
Genome biology 21, 1-18, 2020
Progress toward a universal biomedical data translator
K Fecho, AE Thessen, SE Baranzini, C Bizon, JJ Hadlock, S Huang, ...
Clinical and Translational Science 15 (8), 1838-1847, 2022
WikiPathways 2024: next generation pathway database
A Agrawal, H Balcı, K Hanspers, SL Coort, M Martens, DN Slenter, ...
Nucleic acids research 52 (D1), D679-D689, 2024
Identifying genes in published pathway figure images
A Riutta, K Hanspers, AR Pico
bioRxiv, 379446, 2018
Wikidata as a FAIR knowledge graph for the life sciences
A Waagmeester, G Stupp, S Burgstaller-Muehlbacher, BM Good, M Griffith, ...
bioRxiv, 799684, 2019
BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs
J Callaghan, CH Xu, J Xin, MA Cano, A Riutta, E Zhou, R Juneja, Y Yao, ...
Bioinformatics 39 (9), 2023
25 Years of Pathway Figures
K Hanspers, A Riutta, M Kutmon, AR Pico
bioRxiv, 2020.05. 29.124503, 2020
PI3K-Akt signaling pathway
K Hanspers, A Riutta, E Willighagen, E Weitz
Copper homeostasis
G D'Anna, E Willighagen, G Spampinato, K Hanspers, A Riutta, M Martens, ...
Focal adhesion
T Kelder, K Hanspers, A Pico, E Willighagen, Z Roudbari, D Truong, ...
Brassinolide biosynthetic pathway
A Waagmeester, E Willighagen, A Riutta, D Slenter, F Hu
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