| The immune epitope database (IEDB): 2018 update R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ... Nucleic acids research 47 (D1), D339-D343, 2019 | 1858 | 2019 |
| The immune epitope database (IEDB) 3.0 R Vita, JA Overton, JA Greenbaum, J Ponomarenko, JD Clark, JR Cantrell, ... Nucleic acids research 43 (D1), D405-D412, 2015 | 1210 | 2015 |
| The ontology for biomedical investigations A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ... PloS one 11 (4), e0154556, 2016 | 405 | 2016 |
| ROBOT: a tool for automating ontology workflows RC Jackson, JP Balhoff, E Douglass, NL Harris, CJ Mungall, JA Overton BMC bioinformatics 20, 1-10, 2019 | 182 | 2019 |
| OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ... Database 2021, baab069, 2021 | 170 | 2021 |
| The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability Y He, Z Xiang, J Zheng, Y Lin, JA Overton, E Ong Journal of biomedical semantics 9, 1-10, 2018 | 87 | 2018 |
| Basic Formal Ontology 2.0: Specification and user’s guide B Smith, M Almeida, J Bona, M Brochhausen, W Ceusters, M Courtot, ... National Center for Ontological Research: Buffalo, NY, USA, 2015 | 77 | 2015 |
| A simple standard for sharing ontological mappings (SSSOM) N Matentzoglu, JP Balhoff, SM Bello, C Bizon, M Brush, TJ Callahan, ... Database 2022, baac035, 2022 | 66 | 2022 |
| “Explain” in scientific discourse JA Overton Synthese 190, 1383-1405, 2013 | 60 | 2013 |
| Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study A Ozonoff, J Schaenman, ND Jayavelu, CE Milliren, CS Calfee, CB Cairns, ... EBioMedicine 83, 2022 | 47 | 2022 |
| Biomedical imaging ontologies: A survey and proposal for future work B Smith, S Arabandi, M Brochhausen, M Calhoun, P Ciccarese, S Doyle, ... Journal of pathology informatics 6 (1), 37, 2015 | 47 | 2015 |
| Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies N Matentzoglu, D Goutte-Gattat, SZK Tan, JP Balhoff, S Carbon, ... Database 2022, baac087, 2022 | 43 | 2022 |
| Developing the quantitative histopathology image ontology (QHIO): a case study using the hot spot detection problem MN Gurcan, J Tomaszewski, JA Overton, S Doyle, A Ruttenberg, B Smith Journal of biomedical informatics 66, 129-135, 2017 | 27 | 2017 |
| ROBOT: A command-line tool for ontology development. JA Overton, H Dietze, S Essaid, D Osumi-Sutherland, CJ Mungall ICBO, 2015 | 26 | 2015 |
| Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients J Diray-Arce, S Fourati, ND Jayavelu, R Patel, C Maguire, AC Chang, ... Cell Reports Medicine 4 (6), 2023 | 22 | 2023 |
| FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability R Vita, JA Overton, CJ Mungall, A Sette, B Peters Database 2018, bax105, 2018 | 21 | 2018 |
| Explanation in science JA Overton The University of Western Ontario (Canada), 2012 | 20 | 2012 |
| Reporting and connecting cell type names and gating definitions through ontologies JA Overton, R Vita, P Dunn, JG Burel, SAC Bukhari, KH Cheung, ... BMC bioinformatics 20, 259-264, 2019 | 16 | 2019 |
| An ontology for major histocompatibility restriction R Vita, JA Overton, E Seymour, J Sidney, J Kaufman, RL Tallmadge, ... Journal of Biomedical Semantics 7, 1-7, 2016 | 16 | 2016 |
| Semantic representation of reported measurements in radiology H Oberkampf, S Zillner, JA Overton, B Bauer, A Cavallaro, M Uder, ... BMC medical informatics and decision making 16, 1-12, 2015 | 15 | 2015 |
