Li Charlie Xia
Li Charlie Xia
Biostatistics@EinsteinMedicine
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
Pan-cancer analysis of the extent and consequences of intra-tumor heterogeneity
N Andor, T Graham, M Jansen, LC Xia, C Aktipis, C Petritsch, H Ji, ...
Nature Medicine 22, 105-113, 2016
4002016
Marine bacterial, archaeal and protistan association networks reveal ecological linkages
JA Steele, PD Countway, L Xia, PD Vigil, JM Beman, DY Kim, CET Chow, ...
The ISME journal 5 (9), 1414-1425, 2011
3942011
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
S Weiss, VW Treuren, C Lozupone, K Faust, J Friedman, Y Deng, LC Xia, ...
The ISME Journal 10 (7), 1669, 2016
3132016
Extended local similarity analysis of microbial community and other time series data with replicates
LC Xia, JA Steele, JA Cram, ZG Cardon, SL Simmons, JJ Vallino, ...
BMC systems biology 5, S15, 2011
1402011
Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads
LC Xia, JA Cram, T Chen, JA Fuhrman, F Sun
PloS ONE 6 (12), e27992, 2011
962011
Efficient statistical significance approximation for local similarity analysis of high-throughput time series data
LC Xia, D Ai, J Cram, JA Fuhrman, F Sun
Bioinformatics 29 (2), 230-237, 2013
862013
Integrated metagenomic data analysis demonstrates that a loss of diversity in oral microbiota is associated with periodontitis
D Ai, R Huang, J Wen, C Li, J Zhu, LC Xia#
BMC Genomics 18, 1041, 2017
462017
Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes
JA Cram, LC Xia, DM Needham, R Sachdeva, F Sun, JA Fuhrman
The ISME journal 9 (12), 2573-2586, 2015
402015
CRISPR–Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis
GW Shin, SM Grimes, HJ Lee, BT Lau, LC Xia, HP Ji
Nature communications 8 (1), 1-13, 2017
282017
PPLook: an automated data mining tool for protein-protein interaction
SW Zhang, YJ Li, L Xia, Q Pan
BMC Bioinformatics 11 (1), 326, 2010
212010
Identification of large rearrangements in cancer genomes with barcode linked reads
LC Xia, JM Bell, C Wood-Bouwens, JJ Chen, NR Zhang, HP Ji
Nucleic acids research 46 (4), e19, 2018
202018
Chromosome-scale mega-haplotypes enable digital karyotyping of cancer aneuploidy
JM Bell, BT Lau, SU Greer, C Wood-Bouwens, LC Xia, ID Connolly, ...
Nucleic acids research 45 (19), e162-e162, 2017
142017
Emergence of Hemagglutinin Mutations During the Course of Influenza Infection.
A Cushing, A Kamali, M Winters, E Hopmans, J Bell, SM Grimes, LC Xia, ...
Scientific Reports 5, 16178, 2015
142015
Using Decision Tree Aggregation with Random Forest Model to Identify Gut Microbes Associated with Colorectal Cancer
D Ai*, H Pan, R Han, X Li, G Liu, LC Xia*
Genes 10 (2), 112, 2019
132019
Identifying Gut Microbiota Associated with Colorectal Cancer Using a Zero-Inflated Lognormal Model
D Ai*, H Pan, X Li, Y Gao, G Liu, LC Xia*
Frontiers in Microbiology 10, 826, 2019
132019
Phase transition in sequence unique reconstruction
L Xia, C Zhou
Journal of Systems Science and Complexity 20 (1), 18-29, 2007
132007
A genome-wide approach for detecting novel insertion-deletion variants of mid-range size
LC Xia, S Sakshuwong, E Hopmans, J Bell, S Grimes, D Siegmund, H Ji, ...
Nucleic Acids Research 44 (15), e126, 2016
112016
A rare missense variant of CASP7 is associated with familial late-onset Alzheimer's disease
X Zhang, C Zhu, G Beecham, BN Vardarajan, Y Ma, D Lancour, JJ Farrell, ...
Alzheimer's & Dementia 15 (3), 441-452, 2019
102019
Association of Rare Coding Mutations With Alzheimer Disease and Other Dementias Among Adults of European Ancestry
FLA Patel D, Mez J, Vardarajan BN, Staley L, Chung J, Zhang X, Farrell JJ ...
JAMA Netw Open 2 (3), e191350, 2019
92019
SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution
LC Xia, D Ai, H Lee, N Andor, C Li, NR Zhang, HP Ji
GigaScience 7, giy081, 2018
92018
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Articles 1–20