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Chenxu Zhu
Chenxu Zhu
Core Faculty Member, New York Genome Center; Assistant Professor, Weill Cornell Medicine
Verified email at nygenome.org - Homepage
Title
Cited by
Cited by
Year
Single-cell multimodal omics: the power of many
C Zhu, S Preissl, B Ren
Nature methods 17 (1), 11-14, 2020
3192020
An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome
C Zhu, M Yu, H Huang, I Juric, A Abnousi, R Hu, J Lucero, MM Behrens, ...
Nature structural & molecular biology 26 (11), 1063-1070, 2019
2572019
Joint profiling of histone modifications and transcriptome in single cells from mouse brain
C Zhu, Y Zhang, YE Li, J Lucero, MM Behrens, B Ren
Nature methods 18 (3), 283-292, 2021
1772021
Single-cell 5-formylcytosine landscapes of mammalian early embryos and ESCs at single-base resolution
C Zhu, Y Gao, H Guo, B Xia, J Song, X Wu, H Zeng, K Kee, F Tang, C Yi
Cell stem cell 20 (5), 720-731. e5, 2017
1612017
Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation
J Song, Y Zhuang, C Zhu, H Meng, B Lu, B Xie, J Peng, M Li, C Yi
Nature chemical biology 16 (2), 160-169, 2020
862020
Bisulfite-free, nanoscale analysis of 5-hydroxymethylcytosine at single base resolution
H Zeng, B He, B Xia, D Bai, X Lu, J Cai, L Chen, A Zhou, C Zhu, H Meng, ...
Journal of the American Chemical Society 140 (41), 13190-13194, 2018
732018
Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
C Zhu, L Lu, J Zhang, Z Yue, J Song, S Zong, M Liu, O Stovicek, YQ Gao, ...
Proceedings of the National Academy of Sciences 113 (28), 7792-7797, 2016
642016
Switching demethylation activities between AlkB family RNA/DNA demethylases through exchange of active‐site residues
C Zhu, C Yi
Angewandte Chemie International Edition 53 (14), 3659-3662, 2014
622014
Genome-wide mapping reveals that deoxyuridine is enriched in the human centromeric DNA
X Shu, M Liu, Z Lu, C Zhu, H Meng, S Huang, X Zhang, C Yi
Nature Chemical Biology 14 (7), 680-687, 2018
542018
Transposase-assisted tagmentation of RNA/DNA hybrid duplexes
B Lu, L Dong, D Yi, M Zhang, C Zhu, X Li, C Yi
Elife 9, e54919, 2020
432020
Deciphering TAL effectors for 5-methylcytosine and 5-hydroxymethylcytosine recognition
Y Zhang, L Liu, S Guo, J Song, C Zhu, Z Yue, W Wei, C Yi
Nature communications 8 (1), 901, 2017
352017
Biochemical and structural insights into the mechanism of DNA recognition by Arabidopsis ETHYLENE INSENSITIVE3
J Song, C Zhu, X Zhang, X Wen, L Liu, J Peng, H Guo, C Yi
PLoS One 10 (9), e0137439, 2015
312015
Single-cell epigenome analysis reveals age-associated decay of heterochromatin domains in excitatory neurons in the mouse brain
Y Zhang, ML Amaral, C Zhu, SF Grieco, X Hou, L Lin, J Buchanan, L Tong, ...
Cell research 32 (11), 1008-1021, 2022
212022
A comparative atlas of single-cell chromatin accessibility in the human brain
YE Li, S Preissl, M Miller, ND Johnson, Z Wang, H Jiao, C Zhu, Z Wang, ...
Science 382 (6667), eadf7044, 2023
152023
Oxidative Demethylation of DNA and RNA Mediated by Non‐Heme Iron‐Dependent Dioxygenases
L Lu, C Zhu, B Xia, C Yi
Chemistry–An Asian Journal 9 (8), 2018-2029, 2014
122014
DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes
M Liu, J Zhang, C Zhu, X Zhang, W Xiao, Y Yan, L Liu, H Zeng, YQ Gao, ...
Nature Communications 12 (1), 4108, 2021
112021
Droplet-based single-cell joint profiling of histone modifications and transcriptomes
Y Xie, C Zhu, Z Wang, M Tastemel, L Chang, YE Li, B Ren
Nature Structural & Molecular Biology 30 (10), 1428-1433, 2023
102023
Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson–Crick Geometry
H Zeng, M Mondal, R Song, J Zhang, B Xia, M Liu, C Zhu, B He, YQ Gao, ...
Angewandte Chemie International Edition 58 (1), 130-133, 2019
82019
Simultaneous single-cell analysis of 5mC and 5hmC with SIMPLE-seq
D Bai, X Zhang, H Xiang, Z Guo, C Zhu, C Yi
Nature Biotechnology, 1-12, 2024
22024
SnapFISH: a computational pipeline to identify chromatin loops from multiplexed DNA FISH data
L Lee, H Yu, BB Jia, A Jussila, C Zhu, J Chen, L Xie, A Hafner, S Mishra, ...
Nature Communications 14 (1), 4873, 2023
22023
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