Susannah Jane Salter
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Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
SJ Salter, MJ Cox, EM Turek, ST Calus, WO Cookson, MF Moffatt, ...
BMC biology 12, 1-12, 2014
Dense genomic sampling identifies highways of pneumococcal recombination
C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ...
Nature genetics 46 (3), 305-309, 2014
Recognizing the reagent microbiome
MC de Goffau, S Lager, SJ Salter, J Wagner, A Kronbichler, ...
Nature microbiology 3 (8), 851-853, 2018
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes
C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ...
PLoS genetics 10 (8), e1004547, 2014
Patent Human Infections with the Whipworm, Trichuris trichiura, Are Not Associated with Alterations in the Faecal Microbiota
P Cooper, AW Walker, J Reyes, M Chico, SJ Salter, M Vaca, J Parkhill
PLoS ONE 8 (10), e76573, 2013
Freshwater monitoring by nanopore sequencing
L Urban, A Holzer, JJ Baronas, MB Hall, P Braeuninger-Weimer, ...
Elife 10, e61504, 2021
Variation at the capsule locus, cps, of mistyped and non-typable Streptococcus pneumoniae isolates
SJ Salter, J Hinds, KA Gould, L Lambertsen, WP Hanage, M Antonio, ...
Microbiology 158 (6), 1560-1569, 2012
Dominant Role of Nucleotide Substitution in the Diversification of Serotype 3 Pneumococci over Decades and during a Single Infection
NJ Croucher, AM Mitchell, KA Gould, D Inverarity, L Barquist, T Feltwell, ...
PLoS Genetics 9 (10), e1003868, 2013
Ten millennia of hepatitis B virus evolution
A Kocher, L Papac, R Barquera, FM Key, MA Spyrou, R Hübler, ...
Science 374 (6564), 182-188, 2021
Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination
RJ Mostowy, NJ Croucher, N De Maio, C Chewapreecha, SJ Salter, ...
Molecular biology and evolution 34 (10), 2537-2554, 2017
A longitudinal study of the infant nasopharyngeal microbiota: the effects of age, illness and antibiotic use in a cohort of South East Asian children
SJ Salter, C Turner, W Watthanaworawit, MC de Goffau, J Wagner, ...
PLoS neglected tropical diseases 11 (10), e0005975, 2017
Global Phylogenomic Analysis of Nonencapsulated Streptococcus pneumoniae Reveals a Deep-Branching Classic Lineage That Is Distinct from Multiple Sporadic …
M Hilty, D Wüthrich, SJ Salter, H Engel, S Campbell, R Sá-Leão, ...
Genome biology and evolution 6 (12), 3281-3294, 2014
Pneumococcal within-host diversity during colonization, transmission and treatment
G Tonkin-Hill, C Ling, C Chaguza, SJ Salter, P Hinfonthong, E Nikolaou, ...
Nature Microbiology 7 (11), 1791-1804, 2022
Genetic stabilization of the drug-resistant PMEN1 pneumococcus lineage by its distinctive DpnIII restriction-modification system
RA Eutsey, E Powell, J Dordel, SJ Salter, TA Clark, J Korlach, GD Ehrlich, ...
MBio 6 (3), 10.1128/mbio. 00173-15, 2015
The food-borne identity
SJ Salter
Nature reviews microbiology 12 (8), 533-533, 2014
'Candidatus Ornithobacterium hominis': insights gained from draft genomes obtained from nasopharyngeal swabs
SJ Salter, P Scott, AJ Page, A Tracey, MC de Goffau, C Cormie, ...
Microbial Genomics 5 (2), e000247, 2019
Diverse recruitment to a taxonomically structured global atmospheric microbiota
S Archer, K Lee, T Caruso, M Leung, X Tong, S Salter, G Hinchliffe, T Maki, ...
Res. Square 10, 2021
Attack of the clones
S Baldry
Nature Reviews Microbiology 8 (6), 390-390, 2010
You cannot B. cereus
SJ Salter
Nature Reviews Microbiology 9 (2), 83-83, 2011
Method for culturing Candidatus Ornithobacterium hominis
KA Lawrence, TM Harris, SJ Salter, RW Hall, HC Smith-Vaughan, ...
Journal of microbiological methods 159, 157-160, 2019
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Articles 1–20