Prediction of human-virus protein-protein interactions through a sequence embedding-based machine learning method X Yang, S Yang, Q Li, S Wuchty, Z Zhang Computational and structural biotechnology journal 18, 153-161, 2020 | 120 | 2020 |
SuccinSite: a computational tool for the prediction of protein succinylation sites by exploiting the amino acid patterns and properties MM Hasan, S Yang, Y Zhou, MNH Mollah Molecular BioSystems 12 (3), 786-795, 2016 | 101 | 2016 |
Mapping regulatory variants controlling gene expression in drought response and tolerance in maize S Liu, C Li, H Wang, S Wang, S Yang, X Liu, J Yan, B Li, M Beatty, ... Genome biology 21, 1-22, 2020 | 94 | 2020 |
HVIDB: a comprehensive database for human–virus protein–protein interactions X Yang, X Lian, C Fu, S Wuchty, S Yang, Z Zhang Briefings in bioinformatics 22 (2), 832-844, 2021 | 51 | 2021 |
Critical assessment and performance improvement of plant–pathogen protein–protein interaction prediction methods S Yang, H Li, H He, Y Zhou, Z Zhang Briefings in bioinformatics 20 (1), 274-287, 2019 | 49 | 2019 |
Transfer learning via multi-scale convolutional neural layers for human–virus protein–protein interaction prediction X Yang, S Yang, X Lian, S Wuchty, Z Zhang Bioinformatics 37 (24), 4771-4778, 2021 | 42 | 2021 |
Machine-learning-based predictor of human–bacteria protein–protein interactions by incorporating comprehensive host-network properties X Lian, S Yang, H Li, C Fu, Z Zhang Journal of proteome research 18 (5), 2195-2205, 2019 | 39 | 2019 |
Understanding human-virus protein-protein interactions using a human protein complex-based analysis framework S Yang, C Fu, X Lian, X Dong, Z Zhang MSystems 4 (2), 10.1128/msystems. 00303-18, 2019 | 38 | 2019 |
Cyanidin-3-o-glucoside directly binds to ERα36 and inhibits EGFR-positive triple-negative breast cancer L Wang, H Li, S Yang, W Ma, M Liu, S Guo, J Zhan, H Zhang, SY Tsang, ... Oncotarget 7 (42), 68864, 2016 | 35 | 2016 |
Functional analysis of female‐biased odorant binding protein 6 for volatile and nonvolatile host compounds in Adelphocoris lineolatus (Goeze) L Sun, Q Wang, S Yang, Q Wang, Z Zhang, A Khashaveh, YJ Zhang, ... Insect Molecular Biology 26 (5), 601-615, 2017 | 30 | 2017 |
SPAR: a random forest-based predictor for self-interacting proteins with fine-grained domain information X Liu, S Yang, C Li, Z Zhang, J Song Amino acids 48, 1655-1665, 2016 | 30 | 2016 |
PlaPPISite: a comprehensive resource for plant protein-protein interaction sites X Yang, S Yang, H Qi, T Wang, H Li, Z Zhang BMC plant biology 20, 1-11, 2020 | 28 | 2020 |
PlaD: a transcriptomics database for plant defense responses to pathogens, providing new insights into plant immune system H Qi, Z Jiang, K Zhang, S Yang, F He, Z Zhang Genomics, Proteomics and Bioinformatics 16 (4), 283-293, 2018 | 27 | 2018 |
MAPanalyzer: a novel online tool for analyzing microtubule-associated proteins Y Zhou, S Yang, T Mao, Z Zhang Database 2015, bav108, 2015 | 24 | 2015 |
Prediction of protein ubiquitination sites in Arabidopsis thaliana J Chen, J Zhao, S Yang, Z Chen, Z Zhang Current Bioinformatics 14 (7), 614-620, 2019 | 23 | 2019 |
Current status and future perspectives of computational studies on human–virus protein–protein interactions X Lian, X Yang, S Yang, Z Zhang Briefings in Bioinformatics 22 (5), bbab029, 2021 | 21 | 2021 |
Prediction and analysis of human‐herpes simplex virus type 1 protein‐protein interactions by integrating multiple methods X Lian, X Yang, J Shao, F Hou, S Yang, D Pan, Z Zhang Quantitative Biology 8 (4), 312-324, 2020 | 12 | 2020 |
AraPPISite: a database of fine-grained protein–protein interaction site annotations for Arabidopsis thaliana H Li, S Yang, C Wang, Y Zhou, Z Zhang Plant molecular biology 92, 105-116, 2016 | 12 | 2016 |
GelFAP: Gene Functional Analysis Platform for Gastrodia elata J Yang, Q Xiao, J Xu, L Da, L Guo, L Huang, Y Liu, W Xu, Z Su, S Yang, ... Frontiers in Plant Science 11, 563237, 2020 | 8 | 2020 |
Identification of two nonrearranging IgSF genes in chicken reveals a novel family of putative remnants of an antigen receptor precursor Y Fu, Z Yang, J Huang, X Cheng, X Wang, S Yang, L Ren, Z Lian, H Han, ... The Journal of Immunology 202 (7), 1992-2004, 2019 | 7 | 2019 |