Bin Ma
Bin Ma
Professor of Computer Science, University of Waterloo
Verified email at uwaterloo.ca
TitleCited byYear
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, ...
Nature 420 (6915), 520-562, 2002
68602002
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, GM Weinstock, ML Metzker, DM Muzny, EJ Sodergren, ...
Nature 428 (6982), 493-520, 2004
20842004
The similarity metric
M Li, X Chen, X Li, B Ma, PMB Vitányi
IEEE transactions on Information Theory 50 (12), 3250-3264, 2004
12912004
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
B Ma, K Zhang, C Hendrie, C Liang, M Li, A Doherty‐Kirby, G Lajoie
Rapid communications in mass spectrometry 17 (20), 2337-2342, 2003
10992003
PatternHunter: faster and more sensitive homology search
B Ma, J Tromp, M Li
Bioinformatics 18 (3), 440-445, 2002
9382002
PEAKS DB: De Novo sequencing assisted database search for sensitive and accurate peptide identification
J Zhang, L Xin, B Shan, W Chen, M Xie, D Yuen, W Zhang, Z Zhang, ...
Molecular & Cellular Proteomics, 2011
5542011
PatternHunter II: Highly sensitive and fast homology search
M Li, B Ma, D Kisman, J Tromp
Journal of bioinformatics and computational biology 2 (03), 417-439, 2004
2772004
ZOOM! Zillions of oligos mapped
H Lin, Z Zhang, MQ Zhang, B Ma, M Li
Bioinformatics 24 (21), 2431-2437, 2008
2712008
Distinguishing string selection problems
JK Lanctot, M Li, B Ma, S Wang, L Zhang
Information and Computation 185 (1), 41-55, 2003
2682003
DNACompress: fast and effective DNA sequence compression
X Chen, M Li, B Ma, J Tromp
Bioinformatics 18 (12), 1696-1698, 2002
2662002
SPIDER: software for protein identification from sequence tags with de novo sequencing error
Y Han, B Ma, K Zhang
Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004 …, 2004
2342004
A general edit distance between RNA structures
T Jiang, G Lin, B Ma, K Zhang
Journal of computational biology 9 (2), 371-388, 2002
2312002
On the closest string and substring problems
M Li, B Ma, L Wang
Journal of the ACM (JACM) 49 (2), 157-171, 2002
2282002
From gene trees to species trees
B Ma, M Li, L Zhang
SIAM Journal on Computing 30 (3), 729-752, 2000
1812000
Finding similar regions in many strings
M Li, B Ma, L Wang
Proceedings of the thirty-first annual ACM symposium on Theory of computing …, 1999
1581999
On spaced seeds for similarity search
U Keich, M Li, B Ma, J Tromp
Discrete Applied Mathematics 138 (3), 253-263, 2004
1542004
Chain letters and evolutionary histories
CH Bennett, M Li, B Ma
SCIENTIFIC AMERICAN-AMERICAN EDITION- 288 (6), 76-81, 2003
1492003
De novo sequencing and homology searching
B Ma, R Johnson
Molecular & cellular proteomics 11 (2), 2012
1462012
Mobility limited flip-based sensor networks deployment
S Chellappan, X Bai, B Ma, D Xuan, C Xu
IEEE Transactions on Parallel and Distributed Systems 18 (2), 199-211, 2007
1422007
Finding similar regions in many sequences
M Li, B Ma, L Wang
Journal of Computer and System Sciences 65 (1), 73-96, 2002
1262002
The system can't perform the operation now. Try again later.
Articles 1–20