Bin Ma
Bin Ma
Professor of Computer Science, University of Waterloo
Verified email at uwaterloo.ca
Title
Cited by
Cited by
Year
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, ...
Nature 420 (6915), 520-562, 2002
70872002
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, GM Weinstock, ML Metzker, DM Muzny, EJ Sodergren, ...
Nature 428 (6982), 493-520, 2004
21382004
The similarity metric
M Li, X Chen, X Li, B Ma, PMB Vitányi
IEEE transactions on Information Theory 50 (12), 3250-3264, 2004
13322004
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
B Ma, K Zhang, C Hendrie, C Liang, M Li, A Doherty‐Kirby, G Lajoie
Rapid communications in mass spectrometry 17 (20), 2337-2342, 2003
11562003
PatternHunter: faster and more sensitive homology search
B Ma, J Tromp, M Li
Bioinformatics 18 (3), 440-445, 2002
9672002
PEAKS DB: De Novo sequencing assisted database search for sensitive and accurate peptide identification
J Zhang, L Xin, B Shan, W Chen, M Xie, D Yuen, W Zhang, Z Zhang, ...
Molecular & Cellular Proteomics, 2011
6292011
PatternHunter II: Highly sensitive and fast homology search
M Li, B Ma, D Kisman, J Tromp
Journal of bioinformatics and computational biology 2 (03), 417-439, 2004
2812004
ZOOM! Zillions of oligos mapped
H Lin, Z Zhang, MQ Zhang, B Ma, M Li
Bioinformatics 24 (21), 2431-2437, 2008
2802008
DNACompress: fast and effective DNA sequence compression
X Chen, M Li, B Ma, J Tromp
Bioinformatics 18 (12), 1696-1698, 2002
2762002
Distinguishing string selection problems
JK Lanctot, M Li, B Ma, S Wang, L Zhang
Information and Computation 185 (1), 41-55, 2003
2742003
SPIDER: software for protein identification from sequence tags with de novo sequencing error
Y Han, B Ma, K Zhang
Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004 …, 2004
2422004
A general edit distance between RNA structures
T Jiang, G Lin, B Ma, K Zhang
Journal of computational biology 9 (2), 371-388, 2002
2352002
On the closest string and substring problems
M Li, B Ma, L Wang
Journal of the ACM (JACM) 49 (2), 157-171, 2002
2352002
From gene trees to species trees
B Ma, M Li, L Zhang
SIAM Journal on Computing 30 (3), 729-752, 2000
1872000
Finding similar regions in many strings
M Li, B Ma, L Wang
Proceedings of the thirty-first annual ACM symposium on Theory of computing …, 1999
1591999
On spaced seeds for similarity search
U Keich, M Li, B Ma, J Tromp
Discrete Applied Mathematics 138 (3), 253-263, 2004
1582004
Chain letters and evolutionary histories
CH Bennett, M Li, B Ma
SCIENTIFIC AMERICAN-AMERICAN EDITION- 288 (6), 76-81, 2003
1532003
De novo sequencing and homology searching
B Ma, R Johnson
Molecular & cellular proteomics 11 (2), 2012
1462012
Mobility limited flip-based sensor networks deployment
S Chellappan, X Bai, B Ma, D Xuan, C Xu
IEEE Transactions on Parallel and Distributed Systems 18 (2), 199-211, 2007
1432007
Finding similar regions in many sequences
M Li, B Ma, L Wang
Journal of Computer and System Sciences 65 (1), 73-96, 2002
1312002
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