Julius B. Lucks
TitleCited byYear
Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
JB Lucks, SA Mortimer, C Trapnell, S Luo, S Aviran, GP Schroth, ...
Proceedings of the National Academy of Sciences 108 (27), 11063-11068, 2011
3042011
Versatile RNA-sensing transcriptional regulators for engineering genetic networks
JB Lucks, L Qi, VK Mutalik, D Wang, AP Arkin
Proceedings of the National Academy of Sciences 108 (21), 8617-8622, 2011
2112011
Rationally designed families of orthogonal RNA regulators of translation
VK Mutalik, L Qi, JC Guimaraes, JB Lucks, AP Arkin
Nature chemical biology 8 (5), 447, 2012
1472012
Creating small transcription activating RNAs
J Chappell, MK Takahashi, JB Lucks
Nature chemical biology 11 (3), 214, 2015
1222015
Crystallography on curved surfaces
V Vitelli, JB Lucks, DR Nelson
Proceedings of the National Academy of Sciences 103 (33), 12323-12328, 2006
1212006
Modeling and automation of sequencing-based characterization of RNA structure
S Aviran, C Trapnell, JB Lucks, SA Mortimer, S Luo, GP Schroth, ...
Proceedings of the National Academy of Sciences 108 (27), 11069-11074, 2011
1092011
Toward scalable parts families for predictable design of biological circuits
JB Lucks, L Qi, WR Whitaker, AP Arkin
Current opinion in microbiology 11 (6), 567-573, 2008
1062008
Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription–translation (TX-TL) systems
MK Takahashi, J Chappell, CA Hayes, ZZ Sun, J Kim, V Singhal, ...
ACS synthetic biology 4 (5), 503-515, 2014
1012014
SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing
D Loughrey, KE Watters, AH Settle, JB Lucks
Nucleic acids research 42 (21), e165-e165, 2014
892014
A renaissance in RNA synthetic biology: new mechanisms, applications and tools for the future
J Chappell, KE Watters, MK Takahashi, JB Lucks
Current opinion in chemical biology 28, 47-56, 2015
842015
Why on earth?: Evaluating hypotheses about the physiological functions of human geophagy
SL Young, PW Sherman, JB Lucks, GH Pelto
The Quarterly review of biology 86 (2), 97-120, 2011
832011
Engineering naturally occurring trans -acting non-coding RNAs to sense molecular signals
L Qi, JB Lucks, CC Liu, VK Mutalik, AP Arkin
Nucleic acids research 40 (12), 5775-5786, 2012
822012
An RNA Mapping DataBase for curating RNA structure mapping experiments
P Cordero, JB Lucks, R Das
Bioinformatics 28 (22), 3006-3008, 2012
732012
Characterizing and prototyping genetic networks with cell-free transcription–translation reactions
MK Takahashi, CA Hayes, J Chappell, ZZ Sun, RM Murray, V Noireaux, ...
Methods 86, 60-72, 2015
722015
SHAPE–Seq: high‐throughput RNA structure analysis
SA Mortimer, C Trapnell, S Aviran, L Pachter, JB Lucks
Current protocols in chemical biology 4 (4), 275-297, 2012
672012
Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, MY Angela, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124, 2016
642016
The centrality of RNA for engineering gene expression
J Chappell, MK Takahashi, S Meyer, D Loughrey, KE Watters, J Lucks
Biotechnology journal 8 (12), 1379-1395, 2013
642013
An adaptor from translational to transcriptional control enables predictable assembly of complex regulation
CC Liu, L Qi, JB Lucks, TH Segall-Shapiro, D Wang, VK Mutalik, AP Arkin
Nature methods 9 (11), 1088, 2012
622012
Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq
KE Watters, TR Abbott, JB Lucks
Nucleic acids research 44 (2), e12-e12, 2015
592015
A modular strategy for engineering orthogonal chimeric RNA transcription regulators
MK Takahashi, JB Lucks
Nucleic acids research 41 (15), 7577-7588, 2013
572013
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Articles 1–20