| Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ... Nature 459 (7250), 1122-1125, 2009 | 2295 | 2009 |
| The genesis and source of the H7N9 influenza viruses causing human infections in China TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ... Nature 502 (7470), 241-244, 2013 | 431 | 2013 |
| Automated analysis of phylogenetic clusters M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ... BMC bioinformatics 14 (1), 1-10, 2013 | 216 | 2013 |
| Transmission network parameters estimated from HIV sequences for a nationwide epidemic AJ Leigh Brown, SJ Lycett, L Weinert, GJ Hughes, E Fearnhill, DT Dunn Journal of Infectious Diseases 204 (9), 1463-1469, 2011 | 202 | 2011 |
| Fast dating using least-squares criteria and algorithms TH To, M Jung, S Lycett, O Gascuel Systematic biology 65 (1), 82-97, 2016 | 187 | 2016 |
| Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom GJ Hughes, E Fearnhill, D Dunn, SJ Lycett, A Rambaut, AJL Brown, ... PLoS Pathog 5 (9), e1000590, 2009 | 184 | 2009 |
| Time resolved study of self‐assembled InAs quantum dots H Yu, S Lycett, C Roberts, R Murray Applied physics letters 69 (26), 4087-4089, 1996 | 161 | 1996 |
| Role for migratory wild birds in the global spread of avian influenza H5N8 Global Consortium for H5N8 and Related Influenza Viruses Science 354 (6309), 213-217, 2016 | 146 | 2016 |
| Supersize me: how whole-genome sequencing and big data are transforming epidemiology RR Kao, DT Haydon, SJ Lycett, PR Murcia Trends in microbiology 22 (5), 282-291, 2014 | 118 | 2014 |
| Reassortment patterns of avian influenza virus internal segments among different subtypes L Lu, SJ Lycett, AJL Brown BMC evolutionary biology 14 (1), 1-15, 2014 | 76 | 2014 |
| The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets D Blumenkrantz, KL Roberts, H Shelton, S Lycett, WS Barclay Journal of virology 87 (19), 10539-10551, 2013 | 72 | 2013 |
| Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions S Hué, AE Brown, M Ragonnet-Cronin, SJ Lycett, DT Dunn, E Fearnhill, ... Aids 28 (13), 1967-1975, 2014 | 68 | 2014 |
| Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex G Dudas, T Bedford, S Lycett, A Rambaut Molecular biology and evolution 32 (1), 162-172, 2015 | 67 | 2015 |
| Gene exchange drives the ecological success of a multi-host bacterial pathogen EJ Richardson, R Bacigalupe, EM Harrison, LA Weinert, S Lycett, ... Nature ecology & evolution 2 (9), 1468-1478, 2018 | 66 | 2018 |
| Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data SJ Lycett, MJ Ward, FI Lewis, AFY Poon, SLK Pond, AJL Brown Journal of virology 83 (19), 9901-9910, 2009 | 63 | 2009 |
| Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity EC Thomson, LE Rosen, JG Shepherd, R Spreafico, A da Silva Filipe, ... Cell 184 (5), 1171-1187. e20, 2021 | 59 | 2021 |
| The effect of the PB2 mutation 627K on highly pathogenic H5N1 avian influenza virus is dependent on the virus lineage JS Long, WA Howard, A Núñez, O Moncorgé, S Lycett, J Banks, ... Journal of virology 87 (18), 9983-9996, 2013 | 57 | 2013 |
| Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ... Molecular biology and evolution 34 (1), 185-203, 2017 | 54 | 2017 |
| Estimating reassortment rates in co-circulating Eurasian swine influenza viruses SJ Lycett, G Baillie, E Coulter, S Bhatt, P Kellam, JW McCauley, ... The Journal of general virology 93 (Pt 11), 2326, 2012 | 51 | 2012 |
| Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis H Trewby, D Wright, EL Breadon, SJ Lycett, TR Mallon, C McCormick, ... Epidemics 14, 26-35, 2016 | 47 | 2016 |
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
