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Rikuhiro G. Yamada
Rikuhiro G. Yamada
Verified email at riken.go.jp - Homepage
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Year
An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis
K Kurimoto, Y Yabuta, Y Ohinata, Y Ono, KD Uno, RG Yamada, HR Ueda, ...
Nucleic acids research 34 (5), e42-e42, 2006
4952006
Feedback repression is required for mammalian circadian clock function
TK Sato, RG Yamada, H Ukai, JE Baggs, LJ Miraglia, TJ Kobayashi, ...
Nature genetics 38 (3), 312-319, 2006
4812006
Delay in feedback repression by cryptochrome 1 is required for circadian clock function
M Ukai-Tadenuma, RG Yamada, H Xu, JA Ripperger, AC Liu, HR Ueda
Cell 144 (2), 268-281, 2011
3012011
CKIε/δ-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock
Y Isojima, M Nakajima, H Ukai, H Fujishima, RG Yamada, K Masumoto, ...
Proceedings of the National Academy of Sciences 106 (37), 15744-15749, 2009
3002009
A functional genomics strategy reveals clockwork orange as a transcriptional regulator in the Drosophila circadian clock
A Matsumoto, M Ukai-Tadenuma, RG Yamada, J Houl, KD Uno, ...
Genes & development 21 (13), 1687-1700, 2007
2132007
Muscarinic acetylcholine receptors Chrm1 and Chrm3 are essential for REM sleep
Y Niwa, GN Kanda, RG Yamada, S Shi, GA Sunagawa, ...
Cell Reports 24 (9), 2231-2247. e7, 2018
892018
Temperature-sensitive substrate and product binding underlie temperature-compensated phosphorylation in the clock
Y Shinohara, YM Koyama, M Ukai-Tadenuma, T Hirokawa, M Kikuchi, ...
Molecular cell 67 (5), 783-798. e20, 2017
852017
Molecular mechanisms of REM sleep
RG Yamada, HR Ueda
Frontiers in Neuroscience 13, 495527, 2020
322020
Different circadian expression of major matrix-related genes in various types of cartilage: modulation by light–dark conditions
KK Honda, T Kawamoto, HR Ueda, A Nakashima, T Ueshima, ...
The journal of biochemistry 154 (4), 373-381, 2013
282013
Distinct phosphorylation states of mammalian CaMKIIβ control the induction and maintenance of sleep
D Tone, KL Ode, Q Zhang, H Fujishima, RG Yamada, Y Nagashima, ...
PLoS Biology 20 (10), e3001813, 2022
162022
CUBIC-Cloud provides an integrative computational framework toward community-driven whole-mouse-brain mapping
T Mano, K Murata, K Kon, C Shimizu, H Ono, S Shi, RG Yamada, ...
Cell Reports Methods 1 (2), 2021
152021
Microarrays: statistical methods for circadian rhythms
R Yamada, HR Ueda
Circadian Rhythms: Methods and Protocols, 245-264, 2007
142007
A microfluidic platform based on robust gas and liquid exchange for long-term culturing of explanted tissues
N Ota, GN Kanda, H Moriguchi, Y Aishan, Y Shen, RG Yamada, HR Ueda, ...
Analytical Sciences 35 (10), 1141-1147, 2019
62019
CUBIC-Cloud: an integrative computational framework towards community-driven whole-mouse-brain mapping
T Mano, K Murata, K Kon, C Shimizu, H Ono, S Shi, RG Yamada, ...
Biorxiv, 2020.08. 28.271031, 2020
52020
The circadian clock ticks in organoids
RG Yamada, HR Ueda
The EMBO Journal 41 (2), e110157, 2022
32022
Compass in the data ocean: Toward chronotherapy
RG Yamada, HR Ueda
Proceedings of the National Academy of Sciences 114 (20), 5069-5071, 2017
32017
Genetic and molecular analysis of wild-derived arrhythmic mice
T Watanabe, T Suzuki, A Ishikawa, Y Yokota, HR Ueda, RG Yamada, ...
PloS one 4 (1), e4301, 2009
22009
Circadian ribosome profiling reveals a role for the Period2 upstream open reading frame in sleep
A Millius, RG Yamada, H Fujishima, K Maeda, DM Standley, K Sumiyama, ...
Proceedings of the National Academy of Sciences 120 (40), e2214636120, 2023
12023
Cortical parvalbumin neurons are responsible for homeostatic sleep rebound through CaMKII activation
K Kon, KL Ode, T Mano, H Fujishima, D Tone, C Shimizu, S Shiono, ...
bioRxiv, 2023.04. 29.537929, 2023
12023
Problems in analysis of large-scale data: gene expression microarray analysis
R Yamada, H Ueda
Tanpakushitsu Kakusan koso. Protein, Nucleic Acid, Enzyme 54 (10), 1307-1315, 2009
12009
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Articles 1–20