John E. McCormack
John E. McCormack
Associate Professor in Biology, Occidental College & Director/Curator, Moore Laboratory of Zoology
Verified email at oxy.edu - Homepage
TitleCited byYear
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346, 1320-1331, 2014
10982014
Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales
BC Faircloth, JE McCormack, NG Crawford, MG Harvey, RT Brumfield, ...
Systematic Biology 61, 717-726, 2012
5752012
Applications of next-generation sequencing to phylogeography and phylogenetics
JE McCormack, SM Hird, AJ Zellmer, BC Carstens, RT Brumfield
Molecular Phylogenetics and Evolution 66, 526–538, 2013
4962013
The drivers of tropical speciation
BT Smith, JE McCormack, AM Cuervo, MJ Hickerson, A Aleixo, ...
Nature 515, 406–409, 2014
2862014
More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs
NG Crawford, BC Faircloth, JE McCormack, RT Brumfield, K Winker, ...
Biology Letters 8, 783-786, 2012
2792012
A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing
JE McCormack, MG Harvey, BC Faircloth, NG Crawford, TC Glenn, ...
PLoS One 8, e54848, 2013
2762013
Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis
JE McCormack, BC Faircloth, NG Crawford, PA Gowaty, RT Brumfield, ...
Genome Research 22, 746-754, 2012
2732012
Does niche divergence accompany allopatric divergence in Aphelocoma jays as predicted under ecological speciation?: insights from tests with niche models
JE McCormack, AJ Zellmer, LL Knowles
Evolution 64, 1231-1244, 2010
2652010
Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays
JE McCormack, J Heled, KS Delaney, AT Peterson, LL Knowles
Evolution 65, 184-202, 2011
2262011
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346, 1254449, 2014
2052014
Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics
SV Edwards, Z Xi, A Janke, BC Faircloth, JE McCormack, TC Glenn, ...
Molecular Phylogenetics and Evolution 94, 447-462, 2016
1852016
Recent postglacial range expansion drives the rapid diversification of a songbird lineage in the genus Junco
B Milá, JE McCormack, G Castañeda, RK Wayne, TB Smith
Proceedings of the Royal Society B: Biological Sciences 274, 2653-2660, 2007
1462007
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ...
Genome Biology 13, 415, 2012
1282012
Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design
JE McCormack, H Huang, LL Knowles
Systematic Biology 58, 501-508, 2010
1072010
Sequence capture of ultraconserved elements from bird museum specimens
JE McCormack, WLE Tsai, BC Faircloth
Molecular Ecology Resources 16, 1189-1203, 2016
992016
Speciation in the highlands of Mexico: genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultramarina)
JE McCormack, AT Peterson, E Bonaccorso, TB Smith
Molecular Ecology 17, 2505-2521, 2008
952008
Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences
JE McCormack, JM Maley, SM Hird, EP Derryberry, GR Graves, ...
Molecular Phylogenetics and Evolution 62, 397-406, 2012
872012
Landscape genetics of California mule deer (Odocoileus hemionus): the roles of ecological and historical factors in generating differentiation
KM Pease, AH Freedman, JP Pollinger, JE McCormack, W Buermann, ...
Molecular Ecology 18, 1848-1862, 2009
842009
Sky Islands
JE McCormack, H Huang, LL Knowles
Encyclopedia of Islands 4, 841-843, 2009
792009
Integrating paleoecology and genetics of bird populations in two sky island archipelagos
J McCormack, B Bowen, T Smith
BMC Biology 6, 28, 2008
792008
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Articles 1–20