Daniel Segrè

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Doron LancetProfessor, Dept. Molecular Genetics, Weizmann Institute of Science, Rehovot, IsraelVerified email at weizmann.ac.il
Joshua GoldfordPhysics of Living Systems, MITVerified email at mit.edu
George ChurchHarvard Medical SchoolVerified email at harvard.edu
Niels KlitgordViome IncVerified email at viome.com
Alan R. PachecoETH ZürichVerified email at biol.ethz.ch
Christopher J. MarxBiological Sciences, University of IdahoVerified email at uidaho.edu
Ilija DukovskiResearch Assistant Professor, Bioinformatics Program, Boston UniversityVerified email at bu.edu
Ed ReznikMemorial Sloan Kettering Cancer CenterVerified email at mskcc.org
William HarcombeUniversity of MinnesotaVerified email at umn.edu
Varun MazumdarSeres TherapeuticsVerified email at serestherapeutics.com
Pankaj MehtaProfessor, Physics, Boston UniversityVerified email at bu.edu
Yi-Chien ChangVerified email at bu.edu
David DeamerProfessor of Bimolecular Engineering, UC Santa CruzVerified email at soe.ucsc.edu
Salomon AmarProfessor, Boston UniversityVerified email at nymc.edu
Hsuan-Chao ChiuMediaTekVerified email at mediatek.com
Lina FallerGinkgo BioworksVerified email at bu.edu
Alvaro SanchezAssociate Professor, Department of Ecology & Evolutionary Biology, Yale UniversityVerified email at yale.edu
Djordje BajićPostdoc, Yale UniversityVerified email at yale.edu
Ali R. ZomorrodiMassachusetts General Hospital & Harvard Medical SchoolVerified email at mgh.harvard.edu
Evan SnitkinAssociate Professor at University of Michigan Medical SchoolVerified email at umich.edu

Daniel Segrè

Professor at Boston University, Biology, Biomedical Engineering, Physics, Bioinformatics

Verified email at bu.edu - Homepage

Dynamics and evolution of biological networks Physical biology Systems Biology Metabolism Microbes and Microbial ecosystems


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Analysis of optimality in natural and perturbed metabolic networks D Segre, D Vitkup, GM Church Proceedings of the National Academy of Sciences 99 (23), 15112-15117, 2002	1468	2002
Modular epistasis in yeast metabolism D Segre, A DeLuna, GM Church, R Kishony Nature genetics 37 (1), 77-83, 2005	660	2005
The lipid world D Segré, D Ben-Eli, DW Deamer, D Lancet Origins of Life and Evolution of the Biosphere 31 (1), 119-145, 2001	594	2001
Diminishing returns epistasis among beneficial mutations decelerates adaptation HH Chou, HC Chiu, NF Delaney, D Segrè, CJ Marx Science 332 (6034), 1190-1192, 2011	475	2011
The effect of oxygen on biochemical networks and the evolution of complex life J Raymond, D Segrè Science 311 (5768), 1764-1767, 2006	470	2006
Emergent simplicity in microbial community assembly JE Goldford, N Lu, D Bajić, S Estrela, M Tikhonov, A Sanchez-Gorostiaga, ... Science 361 (6401), 469-474, 2018	409	2018
Deep sequencing of the oral microbiome reveals signatures of periodontal disease B Liu, LL Faller, N Klitgord, V Mazumdar, M Ghodsi, DD Sommer, ... PloS one 7 (6), e37919, 2012	393	2012
Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics WR Harcombe, WJ Riehl, I Dukovski, BR Granger, A Betts, AH Lang, ... Cell reports 7 (4), 1104-1115, 2014	390	2014
Compositional genomes: prebiotic information transfer in mutually catalytic noncovalent assemblies D Segré, D Ben-Eli, D Lancet Proceedings of the National Academy of Sciences 97 (8), 4112-4117, 2000	323	2000
Environments that induce synthetic microbial ecosystems N Klitgord, D Segrè PLoS computational biology 6 (11), e1001002, 2010	314	2010
A linked organ-on-chip model of the human neurovascular unit reveals the metabolic coupling of endothelial and neuronal cells BM Maoz, A Herland, EA FitzGerald, T Grevesse, C Vidoudez, ... Nature biotechnology 36 (9), 865-874, 2018	208	2018
Synthetic ecology of microbes: mathematical models and applications AR Zomorrodi, D Segrè Journal of molecular biology 428 (5), 837-861, 2016	160	2016
Composing life D Segré, D Lancet EMBO reports 1 (3), 217-222, 2000	147	2000
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems AR Pacheco, M Moel, D Segrè Nature communications 10 (1), 1-12, 2019	143	2019
Remnants of an ancient metabolism without phosphate JE Goldford, H Hartman, TF Smith, D Segrè Cell 168 (6), 1126-1134. e9, 2017	137	2017
Graded autocatalysis replication domain (GARD): kinetic analysis of self-replication in mutually catalytic sets D Segré, D Lancet, O Kedem, Y Pilpel Origins of Life and Evolution of the Biosphere 28 (4), 501-514, 1998	133	1998
Ecosystems biology of microbial metabolism N Klitgord, D Segrè Current opinion in biotechnology 22 (4), 541-546, 2011	117	2011
Dichotomy of single-nucleotide polymorphism haplotypes in olfactory receptor genes and pseudogenes Y Gilad, D Segré, K Skorecki, MW Nachman, D Lancet, D Sharon Nature genetics 26 (2), 221-224, 2000	101	2000
Shewanella oneidensis in a lactate-fed pure-culture and a glucose-fed co-culture with Lactococcus lactis with an electrode as electron acceptor MA Rosenbaum, HY Bar, QK Beg, D Segrè, J Booth, MA Cotta, ... Bioresource technology 102 (3), 2623-2628, 2011	96	2011
From annotated genomes to metabolic flux models and kinetic parameter fitting D Segrè, J Zucker, J Katz, X Lin, P D'haeseleer, WP Rindone, ... OMICS A Journal of Integrative Biology 7 (3), 301-316, 2003	91	2003

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