| Similarity network fusion for aggregating data types on a genomic scale B Wang, AM Mezlini, F Demir, M Fiume, Z Tu, M Brudno, B Haibe-Kains, ... Nature methods 11 (3), 333-337, 2014 | 1854 | 2014 |
| SHRiMP: accurate mapping of short color-space reads SM Rumble, P Lacroute, AV Dalca, M Fiume, A Sidow, M Brudno PLoS computational biology 5 (5), e1000386, 2009 | 779 | 2009 |
| P heno t ips: Patient phenotyping software for clinical and research use M Girdea, S Dumitriu, M Fiume, S Bowdin, KM Boycott, S Chénier, ... Human mutation 34 (8), 1057-1065, 2013 | 250 | 2013 |
| Detecting copy number variation with mated short reads P Medvedev, M Fiume, M Dzamba, T Smith, M Brudno Genome research 20 (11), 1613-1622, 2010 | 222 | 2010 |
| GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021 | 166 | 2021 |
| iReckon: simultaneous isoform discovery and abundance estimation from RNA-seq data AM Mezlini, EJM Smith, M Fiume, O Buske, GL Savich, S Shah, S Aparicio, ... Genome research 23 (3), 519-529, 2013 | 164 | 2013 |
| Savant: genome browser for high-throughput sequencing data M Fiume, V Williams, A Brook, M Brudno Bioinformatics 26 (16), 1938-1944, 2010 | 159 | 2010 |
| Genomic architecture of autism from comprehensive whole-genome sequence annotation B Trost, B Thiruvahindrapuram, AJS Chan, W Engchuan, ... Cell 185 (23), 4409-4427. e18, 2022 | 118 | 2022 |
| Consent codes: upholding standard data use conditions SOM Dyke, AA Philippakis, J Rambla De Argila, DN Paltoo, ... PLoS genetics 12 (1), e1005772, 2016 | 91 | 2016 |
| Federated discovery and sharing of genomic data using Beacons M Fiume, M Cupak, S Keenan, J Rambla, S de la Torre, SOM Dyke, ... Nature biotechnology 37 (3), 220-224, 2019 | 88 | 2019 |
| Savant Genome Browser 2: visualization and analysis for population-scale genomics M Fiume, EJM Smith, A Brook, D Strbenac, B Turner, AM Mezlini, ... Nucleic acids research 40 (W1), W615-W621, 2012 | 75 | 2012 |
| The Personal Genome Project Canada: findings from whole genome sequences of the inaugural 56 participants MS Reuter, S Walker, B Thiruvahindrapuram, J Whitney, I Cohn, ... Cmaj 190 (5), E126-E136, 2018 | 65 | 2018 |
| Registered access: authorizing data access SOM Dyke, M Linden, I Lappalainen, JR De Argila, K Carey, D Lloyd, ... European Journal of Human Genetics 26 (12), 1721-1731, 2018 | 41 | 2018 |
| Data sharing as a national quality improvement program: reporting on BRCA1 and BRCA2 variant-interpretation comparisons through the Canadian Open Genetics Repository (COGR) MS Lebo, KR Zakoor, K Chun, MD Speevak, JS Waye, E McCready, ... Genetics in Medicine 20 (3), 294-302, 2018 | 39 | 2018 |
| International federation of genomic medicine databases using GA4GH standards A Thorogood, HL Rehm, P Goodhand, AJH Page, Y Joly, M Baudis, ... Cell Genomics 1 (2), 2021 | 34 | 2021 |
| ClinGen advancing genomic data‐sharing standards as a GA4GH driver project L Dolman, A Page, L Babb, RR Freimuth, H Arachchi, C Bizon, M Brush, ... Human mutation 39 (11), 1686-1689, 2018 | 22 | 2018 |
| Simplifying research access to genomics and health data with Library Cards MN Cabili, K Carey, SOM Dyke, AJ Brookes, M Fiume, F Jeanson, G Kerry, ... Scientific data 5 (1), 1-5, 2018 | 14 | 2018 |
| A federated ecosystem for sharing genomic, clinical data A Page, D Baker, M Bobrow, K Boycott, J Burn, S Chanock, S Donnelly, ... Science, 2016 | 13 | 2016 |
| Genomic architecture of autism spectrum disorder from comprehensive whole-genome sequence annotation B Trost, B Thiruvahindrapuram, AJS Chan, W Engchuan, ... MedRxiv, 2022.05. 05.22274031, 2022 | 3 | 2022 |
| System for Interpretation of Personal Genomes M Fiume University of Toronto (Canada), 2015 | 2 | 2015 |
Michael BrudnoProfessor of Computer Science, University of Toronto; Chief Data Scientist, UHNVerified email at cs.toronto.edu
