| Learning unsupervised feature representations for single cell microscopy images with paired cell inpainting AX Lu, OZ Kraus, S Cooper, AM Moses PLoS computational biology 15 (9), e1007348, 2019 | 82 | 2019 |
| YeastSpotter: accurate and parameter-free web segmentation for microscopy images of yeast cells AX Lu, T Zarin, IS Hsu, AM Moses Bioinformatics 35 (21), 4525-4527, 2019 | 61 | 2019 |
| Enhanced collagen type I synthesis by human tenocytes subjected to periodic in vitro mechanical stimulation E Huisman, A Lu, RG McCormack, A Scott BMC musculoskeletal disorders 15, 1-8, 2014 | 52 | 2014 |
| Mast cells exert pro-inflammatory effects of relevance to the pathophyisology of tendinopathy H Behzad, A Sharma, R Mousavizadeh, A Lu, A Scott Arthritis research & therapy 15 (6), 1-11, 2013 | 52 | 2013 |
| Accumulation of oxidized LDL in the tendon tissues of C57BL/6 or apolipoprotein E knock-out mice that consume a high fat diet: potential impact on tendon health N Grewal, GM Thornton, H Behzad, A Sharma, A Lu, P Zhang, WD Reid, ... PloS one 9 (12), e114214, 2014 | 40 | 2014 |
| Podocalyxin Regulates Murine Lung Vascular Permeability by Altering Endothelial Cell Adhesion (vol 9, e108881, 2014) EJ Debruin, MR Hughes, C Sina, A Lu, J Cait PLOS ONE 9 (12), 2014 | 38 | 2014 |
| Protein structure generation via folding diffusion KE Wu, KK Yang, R van den Berg, J Zou, AX Lu, AP Amini | 34 | 2022 |
| Convolutions are competitive with transformers for protein sequence pretraining KK Yang, N Fusi, AX Lu bioRxiv, 2022.05. 19.492714, 2022 | 28 | 2022 |
| Integrating images from multiple microscopy screens reveals diverse patterns of change in the subcellular localization of proteins AX Lu, YT Chong, IS Hsu, B Strome, LF Handfield, O Kraus, BJ Andrews, ... Elife 7, e31872, 2018 | 24 | 2018 |
| Angiopoietin‐like 4 promotes angiogenesis in the tendon and is increased in cyclically loaded tendon fibroblasts R Mousavizadeh, A Scott, A Lu, GS Ardekani, H Behzad, K Lundgreen, ... The Journal of physiology 594 (11), 2971-2983, 2016 | 21 | 2016 |
| The Cells Out of Sample (COOS) dataset and benchmarks for measuring out-of-sample generalization of image classifiers AX Lu, A Lu, W Schormann, M Ghassemi, D Andrews, A Moses Advances in Neural Information Processing Systems, 1854-1862, 2019 | 18 | 2019 |
| An unsupervised kNN method to systematically detect changes in protein localization in high-throughput microscopy images AX Lu, AM Moses PloS one 11 (7), e0158712, 2016 | 18 | 2016 |
| Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning AX Lu, AX Lu, I Pritišanac, T Zarin, JD Forman-Kay, AM Moses PLOS Computational Biology 18 (6), e1010238, 2022 | 15 | 2022 |
| Influence of repetitive mechanical loading on MMP2 activity in tendon fibroblasts E Huisman, A Lu, S Jamil, R Mousavizadeh, R McCormack, C Roberts, ... Journal of Orthopaedic Research 34 (11), 1991-2000, 2016 | 12 | 2016 |
| Improved conditional flow models for molecule to image synthesis K Yang, S Goldman, W Jin, A Lu, R Barzilay, T Jaakkola, C Uhler arXiv preprint arXiv:2006.08532, 2020 | 10* | 2020 |
| CytoImageNet: A large-scale pretraining dataset for bioimage transfer learning SBZ Hua, AX Lu, AM Moses arXiv preprint arXiv:2111.11646, 2021 | 7 | 2021 |
| Incorporating knowledge of plates in batch normalization improves generalization of deep learning for microscopy images A Lin, A Lu Machine Learning in Computational Biology, 74-93, 2022 | 6 | 2022 |
| Evolution is all you need: phylogenetic augmentation for contrastive learning AX Lu, AX Lu, A Moses arXiv preprint arXiv:2012.13475, 2020 | 6 | 2020 |
| Random embeddings and linear regression can predict protein function T Lu, AX Lu, AM Moses arXiv preprint arXiv:2104.14661, 2021 | 5 | 2021 |
| Pretrained protein language model transfer learning: is the final layer representation what we want? FZ Li, AP Amini, KK Yang, AX Lu | 2 | 2022 |
