Inna Dubchak
TitleCited byYear
Initial sequencing and comparative analysis of the mouse genome
Mouse Genome Sequencing Consortium
Nature 420 (6915), 520, 2002
66592002
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ...
science 313 (5793), 1596-1604, 2006
36252006
The Sorghum bicolor genome and the diversification of grasses
AH Paterson, JE Bowers, R Bruggmann, I Dubchak, J Grimwood, ...
Nature 457 (7229), 551, 2009
22842009
The Chlamydomonas genome reveals the evolution of key animal and plant functions
SS Merchant, SE Prochnik, O Vallon, EH Harris, SJ Karpowicz, ...
Science 318 (5848), 245-250, 2007
21352007
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
Rat Genome Sequencing Project Consortium
Nature 428 (6982), 493, 2004
20192004
The amphioxus genome and the evolution of the chordate karyotype
NH Putnam, T Butts, DEK Ferrier, RF Furlong, U Hellsten, T Kawashima, ...
Nature 453 (7198), 1064, 2008
13392008
VISTA: computational tools for comparative genomics
KA Frazer, L Pachter, A Poliakov, EM Rubin, I Dubchak
Nucleic acids research 32 (suppl_2), W273-W279, 2004
13362004
In vivo enhancer analysis of human conserved non-coding sequences
LA Pennacchio, N Ahituv, AM Moses, S Prabhakar, MA Nobrega, ...
Nature 444 (7118), 499, 2006
10522006
Multi-class protein fold recognition using support vector machines and neural networks
CHQ Ding, I Dubchak
Bioinformatics 17 (4), 349-358, 2001
9842001
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
BM Tyler, S Tripathy, X Zhang, P Dehal, RHY Jiang, A Aerts, ...
Science 313 (5791), 1261-1266, 2006
9472006
VISTA: visualizing global DNA sequence alignments of arbitrary length
C Mayor, M Brudno, JR Schwartz, A Poliakov, EM Rubin, KA Frazer, ...
Bioinformatics 16 (11), 1046-1047, 2000
8992000
VISTA Enhancer Browser—a database of tissue-specific human enhancers
A Visel, S Minovitsky, I Dubchak, LA Pennacchio
Nucleic acids research 35 (suppl_1), D88-D92, 2006
6752006
The genome of the Western clawed frog Xenopus tropicalis
U Hellsten, RM Harland, MJ Gilchrist, D Hendrix, J Jurka, V Kapitonov, ...
Science 328 (5978), 633-636, 2010
6222010
AVID: A global alignment program
N Bray, I Dubchak, L Pachter
Genome research 13 (1), 97-102, 2003
5802003
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
B Palenik, J Grimwood, A Aerts, P Rouzé, A Salamov, N Putnam, ...
Proceedings of the National Academy of Sciences 104 (18), 7705-7710, 2007
5512007
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
S Richards, Y Liu, BR Bettencourt, P Hradecky, S Letovsky, R Nielsen, ...
Genome research 15 (1), 1-18, 2005
5322005
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ...
Science 324 (5924), 268-272, 2009
5272009
MycoCosm portal: gearing up for 1000 fungal genomes
IV Grigoriev, R Nikitin, S Haridas, A Kuo, R Ohm, R Otillar, R Riley, ...
Nucleic acids research 42 (D1), D699-D704, 2013
5072013
rVista for comparative sequence-based discovery of functional transcription factor binding sites
GG Loots, I Ovcharenko, L Pachter, I Dubchak, EM Rubin
Genome research 12 (5), 832-839, 2002
4972002
The genome of Eucalyptus grandis
AA Myburg, D Grattapaglia, GA Tuskan, U Hellsten, RD Hayes, ...
Nature 510 (7505), 356, 2014
4712014
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Articles 1–20