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Zhou Du
Zhou Du
Senior Scientist @ Takeda
Verified email at takeda.com
Title
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Cited by
Year
agriGO: a GO analysis toolkit for the agricultural community
Z Du, X Zhou, Y Ling, Z Zhang, Z Su
Nucleic acids research 38 (suppl_2), W64-W70, 2010
24972010
agriGO v2. 0: a GO analysis toolkit for the agricultural community, 2017 update
T Tian, Y Liu, H Yan, Q You, X Yi, Z Du, W Xu, Z Su
Nucleic acids research 45 (W1), W122-W129, 2017
18362017
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer
Z Du, T Fei, RGW Verhaak, Z Su, Y Zhang, M Brown, Y Chen, XS Liu
Nature structural & molecular biology 20 (7), 908-913, 2013
5682013
Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer
Z Du, T Sun, E Hacisuleyman, T Fei, X Wang, M Brown, JL Rinn, MGS Lee, ...
Nature communications 7 (1), 10982, 2016
2952016
Long neural genes harbor recurrent DNA break clusters in neural stem/progenitor cells
PC Wei, AN Chang, J Kao, Z Du, RM Meyers, FW Alt, B Schwer
Cell 164 (4), 644-655, 2016
2602016
Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability
FL Meng, Z Du, A Federation, J Hu, Q Wang, KR Kieffer-Kwon, ...
Cell 159 (7), 1538-1548, 2014
2592014
PlantGSEA: a gene set enrichment analysis toolkit for plant community
X Yi, Z Du, Z Su
Nucleic acids research 41 (W1), W98-W103, 2013
2532013
Induction of HIV neutralizing antibody lineages in mice with diverse precursor repertoires
M Tian, C Cheng, X Chen, H Duan, HL Cheng, M Dao, Z Sheng, M Kimble, ...
Cell 166 (6), 1471-1484. e18, 2016
2172016
Sequence-intrinsic mechanisms that target AID mutational outcomes on antibody genes
LS Yeap, JK Hwang, Z Du, RM Meyers, FL Meng, A Jakubauskaitė, M Liu, ...
Cell 163 (5), 1124-1137, 2015
1712015
Chromosomal loop domains direct the recombination of antigen receptor genes
J Hu, Y Zhang, L Zhao, RL Frock, Z Du, RM Meyers, F Meng, DG Schatz, ...
Cell 163 (4), 947-959, 2015
1552015
Transcriptional landscape of the human cell cycle
Y Liu, S Chen, S Wang, F Soares, M Fischer, F Meng, Z Du, C Lin, ...
Proceedings of the National Academy of Sciences 114 (13), 3473-3478, 2017
1362017
Genome-wide analysis of histone modifications: H3K4me2, H3K4me3, H3K9ac, and H3K27ac in Oryza sativa L. Japonica
Z Du, H Li, Q Wei, X Zhao, C Wang, Q Zhu, X Yi, W Xu, XS Liu, W Jin, Z Su
Molecular plant 6 (5), 1463-1472, 2013
1202013
Transcription-associated processes cause DNA double-strand breaks and translocations in neural stem/progenitor cells
B Schwer, PC Wei, AN Chang, J Kao, Z Du, RM Meyers, FW Alt
Proceedings of the National Academy of Sciences 113 (8), 2258-2263, 2016
1152016
Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching
J Dong, RA Panchakshari, T Zhang, Y Zhang, J Hu, SA Volpi, RM Meyers, ...
Nature 525 (7567), 134-139, 2015
1092015
BCR selection and affinity maturation in Peyer’s patch germinal centres
H Chen, Y Zhang, AY Ye, Z Du, M Xu, CS Lee, JK Hwang, N Kyritsis, Z Ba, ...
Nature 582 (7812), 421-425, 2020
742020
plantsUPS: a database of plants' Ubiquitin Proteasome System
Z Du, X Zhou, L Li, Z Su
BMC genomics 10, 1-6, 2009
722009
DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions
RA Panchakshari, X Zhang, V Kumar, Z Du, PC Wei, J Kao, J Dong, ...
Proceedings of the National Academy of Sciences 115 (4), 762-767, 2018
662018
Highly sensitive and unbiased approach for elucidating antibody repertoires
SG Lin, Z Ba, Z Du, Y Zhang, J Hu, FW Alt
Proceedings of the National Academy of Sciences 113 (28), 7846-7851, 2016
602016
Sequence intrinsic somatic mutation mechanisms contribute to affinity maturation of VRC01-class HIV-1 broadly neutralizing antibodies
JK Hwang, C Wang, Z Du, RM Meyers, TB Kepler, D Neuberg, PD Kwong, ...
Proceedings of the National Academy of Sciences 114 (32), 8614-8619, 2017
512017
Three classes of recurrent DNA break clusters in brain progenitors identified by 3D proximity-based break joining assay
PC Wei, CS Lee, Z Du, B Schwer, Y Zhang, J Kao, J Zurita, FW Alt
Proceedings of the National Academy of Sciences 115 (8), 1919-1924, 2018
452018
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