Iman Hajirasouliha

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Citations	18803	9354
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Cenk SahinalpSenior Investigator, Cancer Data Science Lab, National Cancer Institute, NIHVerified email at nih.gov
Fereydoun HormozdiariAssistant Professor at University of California - DavisVerified email at ucdavis.edu
Olivier ElementoDirector, Englander Institute for Precision Medicine, Weill Cornell MedicineVerified email at med.cornell.edu
Evan EichlerProfessor of Genome Sciences, University of WashingtonVerified email at gs.washington.edu
Pegah KhosraviComputational Oncology, Memorial Sloan Kettering Cancer CenterVerified email at mskcc.org
The Phuong DaoMemorial Sloan Kettering Cancer CenterVerified email at mskcc.org
Faraz HachAssistant Professor at University of British ColumbiaVerified email at ubc.ca
Can AlkanBilkent University, Ankara, TurkeyVerified email at cs.bilkent.edu.tr
Ehsan KazemiGoogleVerified email at google.com
Ben RaphaelProfessor of Computer Science, Princeton UniversityVerified email at princeton.edu
Deniz YorukogluMassachusetts Institute of TechnologyVerified email at mit.edu
Andrew McPhersonPost Doctoral Fellow, University of British ColumbiaVerified email at bccrc.ca
Camir RickettsPhD Candidate, Weill Cornell MedicineVerified email at cornell.edu
Alexandros SigarasAssistant Professor of Research in Physiology and Biophysics, Weill Cornell MedicineVerified email at med.cornell.edu
Raheleh SalariNatera IncVerified email at natera.com
Victoria PopicStanford University, MITVerified email at stanford.edu
Laura ClarkeEuropean Bioinfomatics InstituteVerified email at ebi.ac.uk
Fuli YuBaylor College of MedicineVerified email at bcm.edu
Ryan GutenkunstAssociate Professor of Molecular and Cellular Biology, University of ArizonaVerified email at arizona.edu
Simon GravelAssociate Professor, McGill UniversityVerified email at mcGill.ca

Iman Hajirasouliha

Assistant Professor, Weill Cornell Medicine of Cornell University, New York City

Verified email at med.cornell.edu - Homepage

Computational Genomics AI Precision Medicine


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A map of human genome variation from population-scale sequencing 1000 Genomes Project Consortium Nature 467 (7319), 1061, 2010	7362	2010
An integrated map of genetic variation from 1,092 human genomes 1000 Genomes Project Consortium Nature 491 (7422), 56, 2012	6905	2012
Mapping copy number variation by population-scale genome sequencing RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ... Nature 470 (7332), 59-65, 2011	1074	2011
Demographic history and rare allele sharing among human populations S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ... Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011	565	2011
Integrative annotation of variants from 1092 humans: application to cancer genomics E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ... Science 342 (6154), 2013	357	2013
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel O Delaneau, J Marchini Nature communications 5 (1), 1-9, 2014	285	2014
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery F Hormozdiari, I Hajirasouliha, P Dao, F Hach, D Yorukoglu, C Alkan, ... Bioinformatics 26 (12), i350-i357, 2010	251	2010
Biomolecular network motif counting and discovery by color coding N Alon, P Dao, I Hajirasouliha, F Hormozdiari, SC Sahinalp Bioinformatics 24 (13), i241-i249, 2008	177	2008
From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer AV Lapuk, C Wu, AW Wyatt, A McPherson, BJ McConeghy, S Brahmbhatt, ... The Journal of pathology 227 (3), 286-297, 2012	164	2012
Fast and scalable inference of multi-sample cancer lineages V Popic, R Salari, I Hajirasouliha, D Kashef-Haghighi, RB West, ... Genome biology 16 (1), 1-17, 2015	160	2015
Deep convolutional neural networks enable discrimination of heterogeneous digital pathology images P Khosravi, E Kazemi, M Imielinski, O Elemento, I Hajirasouliha EBioMedicine 27, 317-328, 2018	151	2018
Detection and characterization of novel sequence insertions using paired-end next-generation sequencing I Hajirasouliha, F Hormozdiari, C Alkan, JM Kidd, I Birol, EE Eichler, ... Bioinformatics 26 (10), 1277-1283, 2010	135	2010
Alu repeat discovery and characterization within human genomes F Hormozdiari, C Alkan, M Ventura, I Hajirasouliha, M Malig, F Hach, ... Genome Research 21 (6), 840-849, 2011	111	2011
A combinatorial approach for analyzing intra-tumor heterogeneity from high-throughput sequencing data I Hajirasouliha, A Mahmoody, BJ Raphael Bioinformatics 30 (12), i78-i86, 2014	109	2014
Simultaneous structural variation discovery among multiple paired-end sequenced genomes F Hormozdiari, I Hajirasouliha, A McPherson, EE Eichler, SC Sahinalp Genome research 21 (12), 2203-2212, 2011	97	2011
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization P Khosravi, E Kazemi, Q Zhan, JE Malmsten, M Toschi, P Zisimopoulos, ... NPJ digital medicine 2 (1), 1-9, 2019	94	2019
A robust benchmark for detection of germline large deletions and insertions JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ... Nature biotechnology, 1-9, 2020	80*	2020
Characterization of structural variants with single molecule and hybrid sequencing approaches A Ritz, A Bashir, S Sindi, D Hsu, I Hajirasouliha, BJ Raphael Bioinformatics 30 (24), 3458-3466, 2014	70	2014
Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer C Wu, AW Wyatt, AV Lapuk, A McPherson, BJ McConeghy, RH Bell, ... The Journal of Pathology, 2012	69	2012
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions D Butler, C Mozsary, C Meydan, J Foox, J Rosiene, A Shaiber, D Danko, ... Nature communications 12 (1), 1-17, 2021	65*	2021

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