Matthew T. Weirauch - Google Scholar Citations

Cited by

	All	Since 2014
Citations	16085	9401
h-index	38	36
i10-index	68	64

2000

1000

500

1500

2004200520062007200820092010201120122013201420152016201720182019178 281 324 500 706 677 783 1056 1039 954 1048 1253 1441 1655 1974 1998

Co-authors

Timothy R. HughesUniversity of TorontoVerified email at utoronto.ca
Leah C KottyanAssistant Professor, Cincinnati Children's Hospitial Medical CenterVerified email at cchmc.org
Josh StuartUC Santa Cruz Genomics InstituteVerified email at ucsc.edu
Nathan SalomonisAssistant Professor Cincinnati Children's Hospital Medical CenterVerified email at cchmc.org
k m kaufmanVerified email at cchmc.org
Brendan FreyFounder & CEO, Deep Genomics; Co-Founder, Vector Institute; Professor, University of TorontoVerified email at psi.toronto.edu
Artem BarskiCincinnati Childrens HospitalVerified email at cchmc.org
Babak AlipanahiGoogle AI, GenomicsVerified email at google.com
Hamed S. NajafabadiAssistant Professor at McGill UniversityVerified email at mcgill.ca
Ross C. HardisonProfessor of Biochemistry and Molecular Biology, The Pennsylvania State UniversityVerified email at psu.edu
Webb MillerPenn State University, UC Santa Barbara, ArizonaVerified email at bx.psu.edu
Albertha J M WalhoutProfessor, Program in Systems Biology, UMass Medical SchoolVerified email at umassmed.edu
Kashish ChetalSenior Analyst Bioinformatics CCHMCVerified email at cchmc.org
Daniel T. StarczynowskiCincinnati Children's Hospital Medical CenterVerified email at cchmc.org
Philip M. KimProfessor, University of TorontoVerified email at kimlab.org
Todd LoweProfessor of Biomolecular Engineering, UC Santa Cruz Genomics Institute, UCSC RNA Center, UniversityVerified email at ucsc.edu
Scott SchwartzVerified email at bx.psu.edu
Joseph R. EckerHoward Hughes Medical Institute and The Salk Institute for Biological StudiesVerified email at Salk.edu
Ziv Bar-JosephProfessor of Computational Biology and Machine Learning, School of Computer Science, Carnegie Mellon UniversityVerified email at andrew.cmu.edu
Martina KoevaSenior Research Scientist, EnBiotixVerified email at enbiotix.com

Matthew T. Weirauch

Associate Professor, Cincinnati Children's Hospital

Verified email at cchmc.org

Computational Biology Transcriptional Regulation Functional Genomics Bioinformatics Genomics


Title	Cited by	Year
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium Nature 447 (7146), 799, 2007	4909	2007
Genome sequence of the Brown Norway rat yields insights into mammalian evolution Rat Genome Sequencing Project Consortium Nature 428 (6982), 493, 2004	2045	2004
The genetic landscape of a cell M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ... science 327 (5964), 425-431, 2010	1926	2010
Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning B Alipanahi, A Delong, MT Weirauch, BJ Frey Nature biotechnology 33 (8), 831, 2015	1032	2015
A compendium of RNA-binding motifs for decoding gene regulation D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ... Nature 499 (7457), 172, 2013	804	2013
The UCSC genome browser database: update 2006 AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ... Nucleic acids research 34 (suppl_1), D590-D598, 2006	752	2006
Determination and inference of eukaryotic transcription factor sequence specificity MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ... Cell 158 (6), 1431-1443, 2014	649	2014
Evaluation of methods for modeling transcription factor sequence specificity MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ... Nature biotechnology 31 (2), 126, 2013	264	2013
MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, NCS Program, ... Nucleic acids research 31 (13), 3518-3524, 2003	259	2003
The human transcription factors SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ... Cell 172 (4), 650-665, 2018	246	2018
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ... Elife 2, e00675, 2013	208	2013
Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease LC Kottyan, BP Davis, JD Sherrill, K Liu, M Rochman, K Kaufman, ... Nature genetics 46 (8), 895, 2014	174	2014
A global analysis of genetic interactions in Caenorhabditis elegans AB Byrne, MT Weirauch, V Wong, M Koeva, SJ Dixon, JM Stuart, PJ Roy Journal of biology 6 (3), 8, 2007	163	2007
C2H2 zinc finger proteins greatly expand the human regulatory lexicon HS Najafabadi, S Mnaimneh, FW Schmitges, M Garton, KN Lam, A Yang, ... Nature biotechnology 33 (5), 555, 2015	153	2015
Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins BRG Gordon, Y Li, A Cote, MT Weirauch, P Ding, TR Hughes, ... Proceedings of the National Academy of Sciences 108 (26), 10690-10695, 2011	151	2011
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana AM Sullivan, AA Arsovski, J Lempe, KL Bubb, MT Weirauch, PJ Sabo, ... Cell reports 8 (6), 2015-2030, 2014	144	2014
Conserved expression without conserved regulatory sequence: the more things change, the more they stay the same MT Weirauch, TR Hughes Trends in genetics 26 (2), 66-74, 2010	144	2010
Genetic associations with gestational duration and spontaneous preterm birth G Zhang, B Feenstra, J Bacelis, X Liu, LM Muglia, J Juodakis, DE Miller, ... New England Journal of Medicine 377 (12), 1156-1167, 2017	115	2017
Unique features of a global human ectoparasite identified through sequencing of the bed bug genome JB Benoit, ZN Adelman, K Reinhardt, A Dolan, M Poelchau, EC Jennings, ... Nature communications 7, 10165, 2016	94	2016
A catalogue of eukaryotic transcription factor types, their evolutionary origin, and species distribution MT Weirauch, TR Hughes A handbook of transcription factors, 25-73, 2011	86	2011

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Upload PDF

Follow this author

Cited by

Co-authors