| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium nature 447 (7146), 799, 2007 | 5170 | 2007 |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution RA Gibbs, L Pachter Nature 428 (6982), 493-521, 2004 | 2154 | 2004 |
| The genetic landscape of a cell M Costanzo, A Baryshnikova, J Bellay, Y Kim, ED Spear, CS Sevier, ... science 327 (5964), 425-431, 2010 | 2078 | 2010 |
| Predicting the sequence specificities of DNA-and RNA-binding proteins by deep learning B Alipanahi, A Delong, MT Weirauch, BJ Frey Nature biotechnology 33 (8), 831-838, 2015 | 1404 | 2015 |
| A compendium of RNA-binding motifs for decoding gene regulation D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ... Nature 499 (7457), 172-177, 2013 | 955 | 2013 |
| The UCSC genome browser database: update 2006 AS Hinrichs, D Karolchik, R Baertsch, GP Barber, G Bejerano, H Clawson, ... Nucleic acids research 34 (suppl_1), D590-D598, 2006 | 871 | 2006 |
| Determination and inference of eukaryotic transcription factor sequence specificity MT Weirauch, A Yang, M Albu, AG Cote, A Montenegro-Montero, P Drewe, ... Cell 158 (6), 1431-1443, 2014 | 833 | 2014 |
| The human transcription factors SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ... Cell 172 (4), 650-665, 2018 | 555 | 2018 |
| Evaluation of methods for modeling transcription factor sequence specificity MT Weirauch, A Cote, R Norel, M Annala, Y Zhao, TR Riley, ... Nature biotechnology 31 (2), 126-134, 2013 | 283 | 2013 |
| MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, NCS Program, ... Nucleic acids research 31 (13), 3518-3524, 2003 | 257 | 2003 |
| Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ... elife 2, e00675, 2013 | 236 | 2013 |
| C2H2 zinc finger proteins greatly expand the human regulatory lexicon HS Najafabadi, S Mnaimneh, FW Schmitges, M Garton, KN Lam, A Yang, ... Nature biotechnology 33 (5), 555-562, 2015 | 202 | 2015 |
| Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease LC Kottyan, BP Davis, JD Sherrill, K Liu, M Rochman, K Kaufman, ... Nature genetics 46 (8), 895-900, 2014 | 192 | 2014 |
| Genetic associations with gestational duration and spontaneous preterm birth G Zhang, B Feenstra, J Bacelis, X Liu, LM Muglia, J Juodakis, DE Miller, ... New England Journal of Medicine 377 (12), 1156-1167, 2017 | 181 | 2017 |
| Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana AM Sullivan, AA Arsovski, J Lempe, KL Bubb, MT Weirauch, PJ Sabo, ... Cell reports 8 (6), 2015-2030, 2014 | 181 | 2014 |
| Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins BRG Gordon, Y Li, A Cote, MT Weirauch, P Ding, TR Hughes, ... Proceedings of the National Academy of Sciences 108 (26), 10690-10695, 2011 | 177 | 2011 |
| A global analysis of genetic interactions in Caenorhabditis elegans AB Byrne, MT Weirauch, V Wong, M Koeva, SJ Dixon, JM Stuart, PJ Roy Journal of biology 6 (3), 8, 2007 | 171 | 2007 |
| Conserved expression without conserved regulatory sequence: the more things change, the more they stay the same MT Weirauch, TR Hughes Trends in genetics 26 (2), 66-74, 2010 | 149 | 2010 |
| Unique features of a global human ectoparasite identified through sequencing of the bed bug genome JB Benoit, ZN Adelman, K Reinhardt, A Dolan, M Poelchau, EC Jennings, ... Nature communications 7 (1), 1-10, 2016 | 112 | 2016 |
| Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity JB Harley, X Chen, M Pujato, D Miller, A Maddox, C Forney, ... Nature genetics 50 (5), 699-707, 2018 | 101 | 2018 |
Xiaoting ChenCincinnati Children's Hospital Medical CenterVerified email at cchmc.org
