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Muhammed Fethullah Simsek
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Year
Effect of receptor dimerization on membrane lipid raft structure continuously quantified on single cells by camera based fluorescence correlation spectroscopy
H Huang, MF Simsek, W Jin, A Pralle
PloS one 10 (3), e0121777, 2015
392015
Spatial fold change of FGF signaling encodes positional information for segmental determination in zebrafish
MF Simsek, EM Özbudak
Cell reports 24 (1), 66-78. e8, 2018
382018
Periodic inhibition of Erk activity drives sequential somite segmentation
MF Simsek, AS Chandel, D Saparov, OQH Zinani, N Clason, EM Özbudak
Nature 613 (7942), 153-159, 2023
262023
Patterning principles of morphogen gradients
MF Simsek, EM Özbudak
Open Biology 12 (10), 220224, 2022
172022
Quantifying spatial and temporal variations of the cell membrane ultra-structure by bimFCS
W Jin, MF Simsek, A Pralle
Methods 140, 151-160, 2018
142018
Regulatory network of the scoliosis-associated genes establishes rostrocaudal patterning of somites in zebrafish
S Keskin, MF Simsek, HT Vu, C Yang, SH Devoto, A Ay, EM Özbudak
Iscience 12, 247-259, 2019
92019
A 3-D tail explant culture to study vertebrate segmentation in zebrafish
MF Simsek, EM Özbudak
JoVE (Journal of Visualized Experiments), e61981, 2021
32021
Cell membrane heterogeneity studied by camera-based fluorescence correlation spectroscopy
MF Simsek
State University of New York at Buffalo, 2015
22015
Human stem cell models unravel mechanisms of somite segmentation
MF Simsek, EM Özbudak
Cell Stem Cell 30 (3), 246-247, 2023
12023
Membrane Cytoskeletal Changes during In-Situ to Invasive Progression of Breast Cancer Cells Observed by Multi-Scale Diffusion Analysis of Transmembrane Proteins
MF Simsek, A Pralle
Biophysical Journal 108 (2), 79a-80a, 2015
12015
Membrane cytoskeleton changes induced in single cells my limited access to laminin or ECM stiffness changes resemble changes observed in invasive tumorigenic cells.
MF Simsek, W Jin, A Pralle
MOLECULAR BIOLOGY OF THE CELL 26, 2015
12015
bim-FCS Analysis of Membrane Protein Diffusion Reveals Dynamics of Membrane Cytoskeleton and Lipid Domains in Intact Cells
M Simsek, H Huang, A Pralle
Biophysical Journal 102 (3), 297a, 2012
12012
Spatiotemporal control of pattern formation during somitogenesis
C McDaniel, MF Simsek, AS Chandel, EM Özbudak
Science Advances 10 (4), eadk8937, 2024
2024
A design logic for sequential segmentation across organisms
MF Simsek, EM Özbudak
The FEBS Journal 290 (21), 5086-5093, 2023
2023
Signal fold-change controls pattern formation
MF Simsek, EM Özbudak
11th Quantitative Biology (q-Bio) Conference, 2017
2017
Live Quantification of Changes to Membrane Cytoskeleton due to Restricted Access to Laminin or Substrate Stiffness
MF Simsek, J Weixiang, A Pralle
Biophysical Journal 110 (3), 94a, 2016
2016
Long-Term Live Observation of Membrane Protein Interaction with Lipid Nanodomains Show Dependence on Cell Cycle and Time After Transfection
MF Simsek, A Pralle
Biophysical Journal 106 (2), 511a, 2014
2014
Membrane ultrastructure modulates immune cell signaling
A Pralle, H Huang, M Simsek
The FASEB Journal 27, 1019.6-1019.6, 2013
2013
Mc Model of Lipid Raft Protein Diffusion Matched to Live Cell Measurements with Controlled Chemical Perturbation Experiments
MF Simsek, A Pralle
Biophysical Journal 104 (2), 427a, 2013
2013
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Articles 1–19