|Nucleotide-resolution DNA double-strand break mapping by next-generation sequencing|
N Crosetto, A Mitra, MJ Silva, M Bienko, N Dojer, Q Wang, E Karaca, ...
Nature Methods, 2013
|Compiling pcre to fpga for accelerating snort ids|
A Mitra, W Najjar, L Bhuyan
Proceedings of the 3rd ACM/IEEE Symposium on Architecture for networking and …, 2007
|A compiler intermediate representation for reconfigurable fabrics|
Z Guo, B Buyukkurt, J Cortes, A Mitra, W Najjar
International Journal of Parallel Programming 36 (5), 493-520, 2008
|Strategies for achieving high sequencing accuracy for low diversity samples and avoiding sample bleeding using illumina platform|
A Mitra, M Skrzypczak, K Ginalski, M Rowicka
PloS one 10 (4), e0120520, 2015
|RISE-Co-S: high performance sensor storage and Co-processing architecture.|
A Banerjee, A Mitra, WA Najjar, D Zeinalipour-Yazti, V Kalogeraki, ...
SECON, 1-12, 2005
|A probabilistic approach to learn chromatin architecture and accurate inference of the NF-κB/RelA regulatory network using ChIP-Seq|
J Yang, A Mitra, N Dojer, S Fu, M Rowicka, AR Brasier
Nucleic acids research 41 (15), 7240-7259, 2013
|High performance, low power sensor platforms featuring gigabyte scale storage|
A Mitra, A Banerjee, W Najjar, D Zeinalipour-Yazti, V Kalogeraki, ...
Third International Workshop on Measurement, Modeling, and Performance …, 2005
|Boosting XML filtering through a scalable FPGA-based architecture.|
A Mitra, MR Vieira, P Bakalov, VJ Tsotras, WA Najjar
|Modulation of gene expression regulated by the transcription factor NF-κB/RelA|
X Li, Y Zhao, B Tian, M Jamaluddin, A Mitra, J Yang, M Rowicka, ...
Journal of Biological Chemistry 289 (17), 11927-11944, 2014
|The ETS factor ESE3/EHF represses IL-6 preventing STAT3 activation and expansion of the prostate cancer stem-like compartment|
D Albino, G Civenni, S Rossi, A Mitra, CV Catapano, GM Carbone
Oncotarget 7 (47), 76756, 2016
|Boosting XML filtering with a scalable FPGA-based architecture|
A Mitra, M Vieira, P Bakalov, W Najjar, V Tsotras
arXiv preprint arXiv:0909.1781, 2009
|i-BLESS is an ultra-sensitive method for detection of DNA double-strand breaks|
A Biernacka, Y Zhu, M Skrzypczak, R Forey, B Pardo, M Grzelak, J Nde, ...
Communications Biology 1 (1), 1-9, 2018
|Towards in-situ data storage in sensor databases|
D Zeinalipour-Yazti, V Kalogeraki, D Gunopulos, A Mitra, A Banerjee, ...
Panhellenic Conference on Informatics, 36-46, 2005
|A promoter-proximal transcript targeted by genetic polymorphism controls E-cadherin silencing in human cancers|
G Pisignano, S Napoli, M Magistri, SN Mapelli, C Pastori, S Di Marco, ...
Nature communications 8 (1), 1-16, 2017
|Automation of IP core interface generation for reconfigurable computing|
Z Guo, A Mitra, W Najjar
2006 International Conference on Field Programmable Logic and Applications, 1-6, 2006
|Epigenetic control of mitochondrial fission enables self-renewal of stem-like tumor cells in human prostate cancer|
G Civenni, R Bosotti, A Timpanaro, R Vàzquez, J Merulla, S Pandit, ...
Cell metabolism 30 (2), 303-318. e6, 2019
|Automatically boosting the software content of system LSI designs|
M Lajolo, K Lahiri, ST Chakradhar, A Mitra
US Patent 7,784,046, 2010
|Dynamic co-processor architecture for software acceleration on csocs|
A Mitra, Z Guo, A Banerjee, W Najjar
2006 International Conference on Computer Design, 127-133, 2006
|Ssb1 and Ssb2 cooperate to regulate mouse hematopoietic stem and progenitor cells by resolving replicative stress|
W Shi, T Vu, D Boucher, A Biernacka, J Nde, RK Pandita, J Straube, ...
Blood, The Journal of the American Society of Hematology 129 (18), 2479-2492, 2017
|Dude, where’s my Peer?|
A Banerjee, A Mitra, M Faloutsos