Manolis Kellis
Manolis Kellis
Professor of Computer Science, MIT and Broad Institute
Verified email at mit.edu - Homepage
TitleCited byYear
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
92132012
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, ...
Nature 458 (7235), 223, 2009
33372009
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
28872012
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317, 2015
26952015
The genotype-tissue expression (GTEx) project
J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ...
Nature genetics 45 (6), 580, 2013
25502013
Transcriptional regulatory code of a eukaryotic genome
CT Harbison, DB Gordon, TI Lee, NJ Rinaldi, KD Macisaac, TW Danford, ...
Nature 431 (7004), 99, 2004
23792004
Mapping and analysis of chromatin state dynamics in nine human cell types
J Ernst, P Kheradpour, TS Mikkelsen, N Shoresh, LD Ward, CB Epstein, ...
Nature 473 (7345), 43, 2011
23262011
Genome sequence, comparative analysis and haplotype structure of the domestic dog
K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ...
Nature 438 (7069), 803, 2005
22822005
Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals
X Xie, J Lu, EJ Kulbokas, TR Golub, V Mootha, K Lindblad-Toh, ...
Nature 434 (7031), 338, 2005
21042005
Histone modifications at human enhancers reflect global cell-type-specific gene expression
ND Heintzman, GC Hon, RD Hawkins, P Kheradpour, A Stark, LF Harp, ...
Nature 459 (7243), 108, 2009
20202009
The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans
GTEx Consortium
Science 348 (6235), 648-660, 2015
19992015
Sequencing and comparison of yeast species to identify genes and regulatory elements
M Kellis, N Patterson, M Endrizzi, B Birren, ES Lander
Nature 423 (6937), 241, 2003
19982003
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
J Brennecke, AA Aravin, A Stark, M Dus, M Kellis, R Sachidanandam, ...
Cell 128 (6), 1089-1103, 2007
19422007
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
18082007
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
O Jaillon, JM Aury, F Brunet, JL Petit, N Stange-Thomann, E Mauceli, ...
Nature 431 (7011), 946, 2004
17892004
The genome sequence of the filamentous fungus Neurospora crassa
JE Galagan, SE Calvo, KA Borkovich, EU Selker, ND Read, D Jaffe, ...
Nature 422 (6934), 859, 2003
16322003
Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
M Kellis, BW Birren, ES Lander
Nature 428 (6983), 617, 2004
15312004
HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants
LD Ward, M Kellis
Nucleic acids research 40 (D1), D930-D934, 2011
15152011
A new Voronoi-based surface reconstruction algorithm
N Amenta, M Bern, M Kamvysselis
12941998
ChromHMM: automating chromatin-state discovery and characterization
J Ernst, M Kellis
Nature methods 9 (3), 215, 2012
12112012
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