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Akram Vasighizaker
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Year
C-PUGP: A cluster-based positive unlabeled learning method for disease gene prediction and prioritization
A Vasighizaker, S Jalili
Computational biology and chemistry 76, 23-31, 2018
232018
A novel one-class classification approach to accurately predict disease-gene association in acute myeloid leukemia cancer
A Vasighizaker, A Sharma, A Dehzangi
PloS one 14 (12), e0226115, 2019
182019
Discovering cell types using manifold learning and enhanced visualization of single-cell RNA-Seq data
A Vasighizaker, S Danda, L Rueda
Scientific reports 12 (1), 120, 2022
132022
Cell Type Annotation Model Selection: General-Purpose vs. Pattern-Aware Feature Gene Selection in Single-Cell RNA-Seq Data
A Vasighizaker, Y Trivedi, L Rueda
Genes 14 (3), 596, 2023
22023
Cell type identification via convolutional neural networks and self-organizing maps on single-cell RNA-seq data
A Vasighizaker, L Zhou, L Rueda
Proceedings of the 12th ACM Conference on Bioinformatics, Computational …, 2021
22021
Comparative Analysis of Supervised Cell Type Detection in Single-Cell RNA-seq Data
A Vasighizaker, S Hora, Y Trivedi, L Rueda
International Work-Conference on Bioinformatics and Biomedical Engineering …, 2022
12022
Bioinformatics and Biomedical Engineering: 9th International Work-Conference, IWBBIO 2022, Maspalomas, Gran Canaria, Spain, June 27–30, 2022, Proceedings, Part II
I Rojas, O Valenzuela, F Rojas, LJ Herrera, F Ortuño
Springer Nature, 2022
12022
Unsupervised Identification of SARS-CoV-2 Target Cell Groups via Nonlinear Dimensionality Reduction on Single-cell RNA-Seq Data
S Danda, A Vasighizaker, L Rueda
2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020
12020
Candidate disease gene prediction using One-Class classification
A Vasighizaker, S Jalili
Soft Computing Journal 4 (1), 74-83, 2016
1*2016
SEGCECO: Subgraph Embedding of Gene expression matrix for prediction of CEll-cell COmmunication
A Vasighizaker, S Hora, R Zeng, L Rueda
Briefings in Bioinformatics 25 (3), bbae160, 2024
2024
A Novel Method to Predict Intercellular Signaling in Single-cell RNA-seq Data via Graph Convolutional Network
A Vasighizaker, S Hora, L Rueda
Intelligent Systems for Molecular Biology (ISMB), 2022
2022
SEGCECO: Subgraph Embedding of Gene expression matrix for CEll cell COmmunication prediction
S Hora, A Vasighizaker, L Rueda
Research in Computational Molecular Biology (RECOMB), 2022
2022
Supervised Cell Type Heterogeneity Detection in Single-cell RNA-seq Data
A Vasighizaker, S Hora, Y Trivedi, L Rueda
International Work-Conference on Bioinformatics and Biomedical Engineering …, 2022
2022
Identification of Enriched Regions in ChIP-Seq Data via a Linear-Time Multi-Level Thresholding Algorithm
M Naik, L Rueda, A Vasighizaker
IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (5 …, 2021
2021
Disease Gene Identification and Prioritization using Machine Learning Algorithms
A Vasighizaker
National Conference on Computer and Information Technology, Tabriz, Iran, 2014
2014
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Articles 1–15