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Shimpei I. Kubota
Shimpei I. Kubota
Lecturer, Institute for Genetic Medicine, Hokkaido University
Verified email at umin.ac.jp
Title
Cited by
Cited by
Year
Whole-body imaging with single-cell resolution by tissue decolorization
K Tainaka, SI Kubota, TQ Suyama, EA Susaki, D Perrin, ...
Cell 159 (4), 911-924, 2014
5172014
Chemical principles in tissue clearing and staining protocols for whole-body cell profiling
K Tainaka, A Kuno, SI Kubota, T Murakami, HR Ueda
Annual review of cell and developmental biology 32, 713-741, 2016
2762016
Whole-body profiling of cancer metastasis with single-cell resolution
SI Kubota, K Takahashi, J Nishida, Y Morishita, S Ehata, K Tainaka, ...
Cell reports 20 (1), 236-250, 2017
2282017
Behavioral alterations associated with targeted disruption of exons 2 and 3 of the Disc1 gene in the mouse
K Kuroda, S Yamada, M Tanaka, M Iizuka, H Yano, D Mori, D Tsuboi, ...
Human molecular genetics 20 (23), 4666-4683, 2011
1552011
A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues
AK Glaser, KW Bishop, LA Barner, EA Susaki, SI Kubota, G Gao, ...
Nature methods 19 (5), 613-619, 2022
792022
Whole-organ analysis of TGF-β-mediated remodelling of the tumour microenvironment by tissue clearing
SI Kubota, K Takahashi, T Mano, K Matsumoto, T Katsumata, S Shi, ...
Communications biology 4 (1), 294, 2021
192021
An analysis modality for vascular structures combining tissue-clearing technology and topological data analysis
K Takahashi, K Abe, SI Kubota, N Fukatsu, Y Morishita, Y Yoshimatsu, ...
Nature communications 13 (1), 5239, 2022
122022
Calcineurin inhibitor inhibits tolerance induction by suppressing terminal exhaustion of donor T cells after allo-HCT
H Senjo, S Harada, SI Kubota, Y Tanaka, T Tateno, Z Zhang, S Okada, ...
Blood 142 (5), 477-492, 2023
82023
Visualization of the cancer cell cycle by tissue‐clearing technology using the Fucci reporter system
K Takahashi, R Tanabe, S Ehata, SI Kubota, Y Morishita, HR Ueda, ...
Cancer Science 112 (9), 3796-3809, 2021
82021
Protocol for imaging and analysis of mouse tumor models with CUBIC tissue clearing
K Takahashi, SI Kubota, S Ehata, HR Ueda, K Miyazono
STAR protocols 1 (3), 100191, 2020
72020
Dupuytren’s contracture-associated SNPs increase SFRP4 expression in non-immune cells including fibroblasts to enhance inflammation development
H Kida, JJ Jiang, Y Matsui, I Takahashi, R Hasebe, D Kawamura, T Endo, ...
International Immunology 35 (7), 303-312, 2023
52023
Zoobiquity experiments show the importance of the local MMP9-plasminogen axis in inflammatory bowel diseases in both dogs and patients
T Yamasaki, N Nagata, T Atsumi, R Hasebe, Y Tanaka, I Ohki, S Kubota, ...
International Immunology 35 (7), 313-326, 2023
32023
Combination therapy with bevacizumab and a CCR2 inhibitor for human ovarian cancer: An in vivo validation study
T Zhai, T Mitamura, L Wang, SI Kubota, M Murakami, S Tanaka, H Watari
Cancer medicine 12 (8), 9697-9708, 2023
32023
Heterogenous expression of endoglin marks advanced renal cancer with distinct tumor microenvironment fitness
Y Momoi, J Nishida, K Miyakuni, M Kuroda, SI Kubota, K Miyazono, ...
Cancer Science 112 (8), 3136-3149, 2021
32021
Whole-Body and Whole-Organ 3D Imaging of Hypoxia Using an Activatable Covalent Fluorescent Probe Compatible with Tissue Clearing
DM Sakamoto, I Tamura, B Yi, S Hasegawa, Y Saito, N Yamada, ...
ACS nano, 2024
22024
Delayed initiation of calcineurin inhibitor is critical for tolerance induction by posttransplant cyclophosphamide
H Senjo, D Hashimoto, S Okada, SI Kubota, A Ito, T Tanaka, Y Saito, ...
Blood 142, 2041, 2023
22023
GM-CSF Promotes the Survival of Peripheral-Derived Myeloid Cells in the Central Nervous System for Pain-Induced Relapse of Neuroinflammation
S Matsuyama, R Yamamoto, K Murakami, N Takahashi, R Nishi, A Ishii, ...
The Journal of Immunology 211 (1), 34-42, 2023
22023
365 days: images of the year
D Cressey
Nature 516 (7531), 2014
22014
Computer model of IL-6-dependent rheumatoid arthritis in F759 mice
R Yamamoto, S Yamada, T Atsumi, K Murakami, A Hashimoto, S Naito, ...
International immunology 35 (9), 403-421, 2023
12023
Click3D: A whole-organ 3D imaging method utilizing tissue clearing-compatible click reaction
I Tamura, DM Sakamoto, B Yi, Y Saito, N Yamada, J Morimoto, ...
2024
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