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Charles J Underwood
Charles J Underwood
Radboud University & MPI for Plant Breeding Research
Verified email at mpipz.mpg.de - Homepage
Title
Cited by
Cited by
Year
GenomeScope: fast reference-free genome profiling from short reads
GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ...
Bioinformatics 33 (14), 2202-2204, 2017
12282017
Nucleosomes and DNA methylation shape meiotic DSB frequency in Arabidopsis thaliana transposons and gene regulatory regions
K Choi, X Zhao, AJ Tock, C Lambing, CJ Underwood, TJ Hardcastle, ...
Genome research 28 (4), 532-546, 2018
2002018
Selective methylation of histone H3 variant H3. 1 regulates heterochromatin replication
Y Jacob*, E Bergamin*, MTA Donoghue, V Mongeon, C LeBlanc, P Voigt, ...
Science 343 (6176), 1249-1253, 2014
1712014
Natural variation and dosage of the HEI10 meiotic E3 ligase control Arabidopsis crossover recombination
PA Ziolkowski*, CJ Underwood*, C Lambing, M Martinez-Garcia, ...
Genes & Development 31 (3), 306-317, 2017
1622017
Epigenetic activation of meiotic recombination near Arabidopsis thaliana centromeres via loss of H3K9me2 and non-CG DNA methylation
CJ Underwood, K Choi, C Lambing, X Zhao, H Serra, F Borges, ...
Genome research 28 (4), 519-531, 2018
1612018
Massive crossover elevation via combination of HEI10 and recq4a recq4b during Arabidopsis meiosis
H Serra, C Lambing, CH Griffin, SD Topp, DC Nageswaran, ...
Proceedings of the National Academy of Sciences 115 (10), 2437-2442, 2018
1132018
Genetic and epigenetic variation of transposable elements in Arabidopsis
CJ Underwood, IR Henderson, RA Martienssen
Current Opinion in Plant Biology 36, 135-141, 2017
932017
Recombination rate heterogeneity within Arabidopsis disease resistance genes
K Choi*, C Reinhard*, H Serra, PA Ziolkowski, CJ Underwood, X Zhao, ...
PLoS Genet 12 (7), e1006179, 2016
812016
A PARTHENOGENESIS allele from apomictic dandelion can induce egg cell division without fertilization in lettuce
CJ Underwood, K Vijverberg, D Rigola, S Okamoto, C Oplaat, RHM Camp, ...
Nature Genetics 54, 84-93, 2022
612022
Regulation of microRNA-mediated developmental changes by the SWR1 chromatin remodeling complex
K Choi, J Kim, SY Müller, M Oh, C Underwood, I Henderson, I Lee
Plant physiology 171 (2), 1128-1143, 2016
522016
A chromosome scale tomato genome built from complementary PacBio and Nanopore sequences alone reveals extensive linkage drag during breeding
WMJ van Rengs, MHW Schmidt, S Effgen, DB Le, Y Wang, MWAM Zaidan, ...
The Plant Journal 110 (2), 572-588, 2022
332022
Engineering apomixis: clonal seeds approaching the fields
CJ Underwood, R Mercier
Annual Review of Plant Biology 73, 201-225, 2022
312022
Heterogeneous transposable elements as silencers, enhancers and targets of meiotic recombination
CJ Underwood, K Choi
Chromosoma 128 (3), 279-296, 2019
242019
Natural variation identifies SNI1, the SMC5/6 component, as a modifier of meiotic crossover in Arabidopsis
L Zhu, N Fernández-Jiménez, M Szymanska-Lejman, A Pelé, ...
Proceedings of the National Academy of Sciences 118 (33), e2021970118, 2021
232021
Meiosis in crops: from genes to genomes
Y Wang, WMJ van Rengs, MWAM Zaidan, CJ Underwood
Journal of experimental botany 72 (18), 6091-6109, 2021
222021
The emerging role of small RNAs in ovule development, a kind of magic
R Petrella, M Cucinotta, MA Mendes, CJ Underwood, L Colombo
Plant Reproduction 34 (4), 335-351, 2021
152021
Machine learning reveals conserved chromatin patterns determining meiotic recombination sites in plants
M Wang, S Shilo, A Zhou, M Zelkowski, MA Olson, I Azuri, ...
bioRxiv, 2022.07. 11.499557, 2022
42022
Argonautes team up to silence transposable elements in Arabidopsis
CJ Underwood, RA Martienssen
The EMBO journal 34 (5), 579-580, 2015
42015
A gap-free tomato genome built from complementary PacBio and Nanopore long DNA sequences reveals extensive linkage drag during breeding
WMJ van Rengs, MHW Schmidt, S Effgen, Y Wang, MWAM Zaidan, ...
BioRxiv, 2021.08. 30.456472, 2021
32021
Apomixis
Y Wang, CJ Underwood
Current Biology 33 (8), R293-R295, 2023
22023
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