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Charles Bowman
Charles Bowman
Bioinformatics Analyst, TSRI
Verified email at scripps.edu - Homepage
Title
Cited by
Cited by
Year
Comparative genomic analysis of 60 mycobacteriophage genomes: genome clustering, gene acquisition, and gene size
GF Hatfull, D Jacobs-Sera, JG Lawrence, WH Pope, DA Russell, CC Ko, ...
Journal of molecular biology 397 (1), 119-143, 2010
3442010
Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
WH Pope, CA Bowman, DA Russell, D Jacobs-Sera, DJ Asai, ...
Elife 4, e06416, 2015
2952015
On the nature of mycobacteriophage diversity and host preference
D Jacobs-Sera, LJ Marinelli, C Bowman, GW Broussard, CG Bustamante, ...
Virology 434 (2), 187-201, 2012
1892012
Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution
WH Pope, D Jacobs-Sera, DA Russell, CL Peebles, Z Al-Atrache, ...
PloS one 6 (1), e16329, 2011
1692011
Propionibacterium acnes bacteriophages display limited genetic diversity and broad killing activity against bacterial skin isolates
LJ Marinelli, S Fitz-Gibbon, C Hayes, C Bowman, M Inkeles, A Loncaric, ...
MBio 3 (5), 10.1128/mbio. 00279-12, 2012
1132012
Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science, Phage Hunters Integrating Research and Education, Mycobacterial Genetics Course. 2015 …
WH Pope, CA Bowman, DA Russell, D Jacobs-Sera, DJ Asai, ...
Elife 4, e06416, 2015
1022015
Structural definition of a neutralization-sensitive epitope on the MERS-CoV S1-NTD
N Wang, O Rosen, L Wang, HL Turner, LJ Stevens, KS Corbett, ...
Cell reports 28 (13), 3395-3405. e6, 2019
802019
Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates
CA Cottrell, J van Schooten, CA Bowman, M Yuan, D Oyen, M Shin, ...
PLoS pathogens 16 (8), e1008753, 2020
592020
Snapshot of haloarchaeal tailed virus genomes
A Senčilo, D Jacobs-Sera, DA Russell, CC Ko, CA Bowman, ...
RNA biology 10 (5), 803-816, 2013
562013
Cluster M mycobacteriophages Bongo, PegLeg, and Rey with unusually large repertoires of tRNA isotypes
WH Pope, KR Anders, M Baird, CA Bowman, MM Boyle, GW Broussard, ...
Journal of virology 88 (5), 2461-2480, 2014
532014
Potent anti-influenza H7 human monoclonal antibody induces separation of hemagglutinin receptor-binding head domains
HL Turner, J Pallesen, S Lang, S Bangaru, S Urata, S Li, CA Cottrell, ...
PLoS biology 17 (2), e3000139, 2019
372019
Characterization of prophages containing “evolved” Dit/Tal modules in the genome of Lactobacillus casei BL23
ME Dieterle, J Fina Martin, R Durán, SI Nemirovsky, C Sanchez Rivas, ...
Applied microbiology and biotechnology 100 (21), 9201-9215, 2016
342016
Comparative genomics of cluster O mycobacteriophages
SG Cresawn, WH Pope, D Jacobs-Sera, CA Bowman, DA Russell, ...
PLoS One 10 (3), e0118725, 2015
342015
Exposing the secrets of two well-known Lactobacillus casei phages, J-1 and PL-1, by genomic and structural analysis
ME Dieterle, C Bowman, C Batthyany, E Lanzarotti, A Turjanski, G Hatfull, ...
Applied and environmental microbiology 80 (22), 7107-7121, 2014
262014
EMHP: an accurate automated hole masking algorithm for single-particle cryo-EM image processing
Z Berndsen, C Bowman, H Jang, AB Ward
Bioinformatics 33 (23), 3824-3826, 2017
212017
From structure to sequence: antibody discovery using cryoEM
A Antanasijevic, CA Bowman, RN Kirchdoerfer, CA Cottrell, G Ozorowski, ...
Science Advances 8 (3), eabk2039, 2022
182022
Complete genomic sequences of Propionibacterium freudenreichii phages from Swiss cheese reveal greater diversity than Cutibacterium (formerly Propionibacterium) acnes phages
L Cheng, LJ Marinelli, N Grosset, ST Fitz-Gibbon, CA Bowman, BQ Dang, ...
BMC microbiology 18, 1-13, 2018
182018
pdm_utils: a SEA-PHAGES MySQL phage database management toolkit
TN Mavrich, C Gauthier, L Abad, CA Bowman, SG Cresawn, GF Hatfull
Bioinformatics 37 (16), 2464-2466, 2021
122021
Time-course, negative-stain electron microscopy–based analysis for investigating protein–protein interactions at the single-molecule level
B Nogal, CA Bowman, AB Ward
Journal of Biological Chemistry 292 (47), 19400-19410, 2017
102017
Genome sequences of mycobacteriophages AlanGrant, Baee, Corofin, OrangeOswald, and Vincenzo, new members of cluster B
WH Pope, ME Carbonara, HM Cioffi, T Cruz, BQ Dang, AN Doyle, OH Fan, ...
Genome announcements 3 (3), 10.1128/genomea. 00586-15, 2015
72015
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