René L Warren
TitleCited byYear
Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution
SP Shah, RD Morin, J Khattra, L Prentice, T Pugh, A Burleigh, A Delaney, ...
Nature 461 (7265), 809, 2009
10392009
Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma
M Castellarin, RL Warren, JD Freeman, L Dreolini, M Krzywinski, ...
Genome research 22 (2), 299-306, 2012
7922012
The cardiac transcription factors Nkx2‐5 and GATA‐4 are mutual cofactors
D Durocher, F Charron, R Warren, RJ Schwartz, M Nemer
The EMBO journal 16 (18), 5687-5696, 1997
6811997
The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse
MP McLeod, RL Warren, WWL Hsiao, N Araki, M Myhre, C Fernandes, ...
Proceedings of the National Academy of Sciences 103 (42), 15582-15587, 2006
5732006
Assembling millions of short DNA sequences using SSAKE
RL Warren, GG Sutton, SJM Jones, RA Holt
Bioinformatics 23 (4), 500-501, 2006
5562006
Neo-antigens predicted by tumor genome meta-analysis correlate with increased patient survival
SD Brown, RL Warren, EA Gibb, SD Martin, JJ Spinelli, BH Nelson, ...
Genome research, 2014
3242014
Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing
JD Freeman, RL Warren, JR Webb, BH Nelson, RA Holt
Genome research, 2009
3082009
Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million …
RL Warren, JD Freeman, T Zeng, G Choe, S Munro, R Moore, JR Webb, ...
Genome research, 2011
2412011
Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach
MN Bainbridge, RL Warren, M Hirst, T Romanuik, T Zeng, A Go, ...
BMC genomics 7 (1), 246, 2006
1642006
The cumate gene-switch: a system for regulated expression in mammalian cells
A Mullick, Y Xu, R Warren, M Koutroumanis, C Guilbault, S Broussau, ...
BMC biotechnology 6 (1), 43, 2006
1212006
Complete haplotype sequence of the human immunoglobulin heavy-chain variable, diversity, and joining genes and characterization of allelic and copy-number variation
CT Watson, KM Steinberg, J Huddleston, RL Warren, M Malig, J Schein, ...
The American Journal of Human Genetics 92 (4), 530-546, 2013
1192013
Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts
CA D’Souza, JW Kronstad, G Taylor, R Warren, M Yuen, G Hu, WH Jung, ...
MBio 2 (1), e00342-10, 2011
1192011
Co-occurrence of anaerobic bacteria in colorectal carcinomas
RL Warren, DJ Freeman, S Pleasance, P Watson, RA Moore, K Cochrane, ...
Microbiome 1 (1), 16, 2013
1122013
Derivation of HLA types from shotgun sequence datasets
RL Warren, G Choe, DJ Freeman, M Castellarin, S Munro, R Moore, ...
Genome medicine 4 (12), 95, 2012
822012
Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism
RL Warren, CI Keeling, MMS Yuen, A Raymond, GA Taylor, ...
The Plant Journal 83 (2), 189-212, 2015
782015
ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter
SD Jackman, BP Vandervalk, H Mohamadi, J Chu, S Yeo, SA Hammond, ...
Genome research, gr. 214346.116, 2017
752017
Brain microbial populations in HIV/AIDS: α-proteobacteria predominate independent of host immune status
WG Branton, KK Ellestad, F Maingat, BM Wheatley, E Rud, RL Warren, ...
PloS one 8 (1), e54673, 2013
712013
Functional characterization of a catabolic plasmid from polychlorinated-biphenyl-degrading Rhodococcus sp. strain RHA1
R Warren, WWL Hsiao, H Kudo, M Myhre, M Dosanjh, A Petrescu, ...
Journal of bacteriology 186 (22), 7783-7795, 2004
692004
The sensitivity of massively parallel sequencing for detecting candidate infectious agents associated with human tissue
RA Moore, RL Warren, JD Freeman, JA Gustavsen, C Chénard, ...
PloS one 6 (5), e19838, 2011
602011
Transcription of foreign DNA in Escherichia coli
RL Warren, JD Freeman, RC Levesque, DE Smailus, S Flibotte, RA Holt
Genome research, 2008
572008
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Articles 1–20