D. Peter Tieleman
D. Peter Tieleman
Canada Research Chair in Molecular Simulation, University of Calgary
Verified email at ucalgary.ca - Homepage
Cited by
Cited by
The MARTINI force field: coarse grained model for biomolecular simulations
SJ Marrink, HJ Risselada, S Yefimov, DP Tieleman, AH De Vries
The journal of physical chemistry B 111 (27), 7812-7824, 2007
The MARTINI coarse-grained force field: extension to proteins
L Monticelli, SK Kandasamy, X Periole, RG Larson, DP Tieleman, ...
Journal of chemical theory and computation 4 (5), 819-834, 2008
Gromacs user manual version 3.2
D van der Spoel, E Lindahl, B Hess, AR Van Buuren, E Apol, ...
Nijenborgh 4, 9747, 2004
Perspective on the Martini model
SJ Marrink, DP Tieleman
Chemical Society Reviews 42 (16), 6801-6822, 2013
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems
DP Tieleman, SJ Marrink, HJC Berendsen
Biochimica et Biophysica Acta (BBA)-Reviews on Biomembranes 1331 (3), 235-270, 1997
Improved parameters for the martini coarse-grained protein force field
DH de Jong, G Singh, WFD Bennett, C Arnarez, TA Wassenaar, ...
Journal of chemical theory and computation 9 (1), 687-697, 2013
Lipid organization of the plasma membrane
HI Ingˇlfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ...
Journal of the american chemical society 136 (41), 14554-14559, 2014
Molecular dynamics simulations of a fully hydrated dipalmitoylphosphatidylcholine bilayer with different macroscopic boundary conditions and parameters
DP Tieleman, HJC Berendsen
The Journal of chemical physics 105 (11), 4871-4880, 1996
Computer simulation study of fullerene translocation through lipid membranes
J Wong-Ekkabut, S Baoukina, W Triampo, IM Tang, DP Tieleman, ...
Nature nanotechnology 3 (6), 363, 2008
Distribution of amino acids in a lipid bilayer from computer simulations
JL MacCallum, WFD Bennett, DP Tieleman
Biophysical journal 94 (9), 3393-3404, 2008
Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations
TA Wassenaar, HI Ingˇlfsson, RA Böckmann, DP Tieleman, SJ Marrink
Journal of chemical theory and computation 11 (5), 2144-2155, 2015
Effect of lipid peroxidation on the properties of lipid bilayers: a molecular dynamics study
J Wong-Ekkabut, Z Xu, W Triampo, I Tang, D Peter Tieleman, L Monticelli
Biophysical journal 93 (12), 4225-4236, 2007
Simulation of pore formation in lipid bilayers by mechanical stress and electric fields
DP Tieleman, H Leontiadou, AE Mark, SJ Marrink
Journal of the American Chemical Society 125 (21), 6382-6383, 2003
Setting up and running molecular dynamics simulations of membrane proteins
C Kandt, WL Ash, D Peter Tieleman
Methods 41 (4), 475-488, 2007
Lipids on the move: simulations of membrane pores, domains, stalks and curves
SJ Marrink, AH De Vries, DP Tieleman
Biochimica et Biophysica Acta (BBA)-Biomembranes 1788 (1), 149-168, 2009
The molecular basis of electroporation
DP Tieleman
BMC biochemistry 5 (1), 1-12, 2004
Going backward: a flexible geometric approach to reverse transformation from coarse grained to atomistic models
TA Wassenaar, K Pluhackova, RA Böckmann, SJ Marrink, DP Tieleman
Journal of chemical theory and computation 10 (2), 676-690, 2014
A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer
DP Tieleman, HJC Berendsen
Biophysical Journal 74 (6), 2786-2801, 1998
Methodological issues in lipid bilayer simulations
C AnÚzo, AH de Vries, HD H÷ltje, DP Tieleman, SJ Marrink
The Journal of Physical Chemistry B 107 (35), 9424-9433, 2003
Molecular dynamics simulations of dodecylphosphocholine micelles at three different aggregate sizes: micellar structure and chain relaxation
DP Tieleman, D Van der Spoel, HJC Berendsen
The Journal of Physical Chemistry B 104 (27), 6380-6388, 2000
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