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Alexandre Cunha
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Year
Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust
HMT Choi, M Schwarzkopf, ME Fornace, A Acharya, G Artavanis, ...
Development 145 (12), dev165753, 2018
8532018
Fast nonlocal filtering applied to electron cryomicroscopy
J Darbon, A Cunha, TF Chan, S Osher, GJ Jensen
2008 5th IEEE International Symposium on biomedical imaging: from nano to …, 2008
3292008
Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana
AHK Roeder, V Chickarmane, A Cunha, B Obara, BS Manjunath, ...
PLoS biology 8 (5), e1000367, 2010
2762010
Feratt: Facial expression recognition with attention net
PD Marrero Fernandez, FA Guerrero Pena, T Ren, A Cunha
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2019
1262019
Cell cycle regulates cell type in the Arabidopsis sepal
AHK Roeder, A Cunha, CK Ohno, EM Meyerowitz
Development 139 (23), 4416-4427, 2012
1132012
Auxin depletion from leaf primordia contributes to organ patterning
J Qi, Y Wang, T Yu, A Cunha, B Wu, T Vernoux, E Meyerowitz, Y Jiao
Proceedings of the National Academy of Sciences 111 (52), 18769-18774, 2014
1112014
Computational morphodynamics: a modeling framework to understand plant growth
V Chickarmane, AHK Roeder, PT Tarr, A Cunha, C Tobin, EM Meyerowitz
Annual review of plant biology 61, 65-87, 2010
922010
Multiclass weighted loss for instance segmentation of cluttered cells
FA Guerrero-Pena, PDM Fernandez, TI Ren, M Yui, E Rothenberg, ...
2018 25th IEEE International Conference on Image Processing (ICIP), 2451-2455, 2018
802018
Computational morphodynamics of plants: integrating development over space and time
AHK Roeder, PT Tarr, C Tobin, X Zhang, V Chickarmane, A Cunha, ...
Nature reviews Molecular cell biology 12 (4), 265-273, 2011
802011
CNN-based preprocessing to optimize watershed-based cell segmentation in 3D confocal microscopy images
D Eschweiler, TV Spina, RC Choudhury, E Meyerowitz, A Cunha, ...
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019
682019
A computational image analysis glossary for biologists
AHK Roeder, A Cunha, MC Burl, EM Meyerowitz
Development 139 (17), 3071-3080, 2012
662012
Automatic boundary sizing for 2D and 3D meshes
A Cunha, S Canann, S Saigal
ASME APPLIED MECHANICS DIVISION-PUBLICATIONS-AMD 220, 65-72, 1997
471997
The Cell Tracking Challenge: 10 years of objective benchmarking
M Maška, V Ulman, P Delgado-Rodriguez, E Gómez-de-Mariscal, ...
Nature Methods 20 (7), 1010-1020, 2023
412023
A bezier-based approach to unstructured moving meshes
D Cardoze, A Cunha, GL Miller, T Phillips, N Walkington
Proceedings of the twentieth annual symposium on Computational geometry, 310-319, 2004
372004
J regularization improves imbalanced multiclass segmentation
FAG Pena, PDM Fernandez, PT Tarr, TI Ren, EM Meyerowitz, A Cunha
2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), 1-5, 2020
352020
Osseointegration of atmospheric plasma‐sprayed titanium implants: Influence of the native oxide layer
A Cunha, RP Renz, E Blando, RB de Oliveira, R Hübler
Journal of Biomedical Materials Research Part A: An Official Journal of The …, 2014
292014
Cell segmentation in 3D confocal images using supervoxel merge-forests with CNN-based hypothesis selection
J Stegmaier, TV Spina, AX Falcao, A Bartschat, R Mikut, E Meyerowitz, ...
2018 IEEE 15th International symposium on biomedical imaging (ISBI 2018 …, 2018
252018
Macropinocytosis-mediated membrane recycling drives neural crest migration by delivering F-actin to the lamellipodium
Y Li, WG Gonzalez, A Andreev, W Tang, S Gandhi, A Cunha, D Prober, ...
Proceedings of the National Academy of Sciences 117 (44), 27400-27411, 2020
232020
A weakly supervised method for instance segmentation of biological cells
FA Guerrero-Peña, PDM Fernandez, TI Ren, A Cunha
Domain Adaptation and Representation Transfer and Medical Image Learning …, 2019
212019
Fast noise reduction in digital images and video
AL Cunha, JB Darbon
US Patent 8,139,650, 2012
192012
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