|Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia|
PF Dunfield, A Yuryev, P Senin, AV Smirnova, MB Stott, S Hou, B Ly, ...
Nature 450 (7171), 879-882, 2007
|Multilocus sequence typing as a replacement for serotyping in Salmonella enterica|
M Achtman, J Wain, FX Weill, S Nair, Z Zhou, V Sangal, MG Krauland, ...
PLoS Pathog 8 (6), e1002776, 2012
|A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic|
MTG Holden, LY Hsu, K Kurt, LA Weinert, AE Mather, SR Harris, ...
Genome research 23 (4), 653-664, 2013
|A genomic overview of the population structure of Salmonella|
NF Alikhan, Z Zhou, MJ Sergeant, M Achtman
PLoS genetics 14 (4), e1007261, 2018
|Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia|
S Hou, KS Makarova, JHW Saw, P Senin, BV Ly, Z Zhou, Y Ren, J Wang, ...
Biology Direct 3 (1), 26, 2008
|A recalibrated molecular clock and independent origins for the cholera pandemic clones|
L Feng, PR Reeves, R Lan, Y Ren, C Gao, Z Zhou, Y Ren, J Cheng, ...
PloS one 3 (12), e4053, 2008
|Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri|
C Ye, R Lan, S Xia, J Zhang, Q Sun, S Zhang, H Jing, L Wang, Z Li, ...
Journal of clinical microbiology 48 (2), 419-426, 2010
|GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens|
Z Zhou, NF Alikhan, MJ Sergeant, N Luhmann, C Vaz, AP Francisco, ...
Genome research 28 (9), 1395-1404, 2018
|Derivation of Escherichia coli O157: H7 from its O55: H7 precursor|
Z Zhou, X Li, B Liu, L Beutin, J Xu, Y Ren, L Feng, R Lan, PR Reeves, ...
PloS one 5 (1), e8700, 2010
|Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12|
T Ferenci, Z Zhou, T Betteridge, Y Ren, Y Liu, L Feng, PR Reeves, ...
Journal of bacteriology 191 (12), 4025-4029, 2009
|Clinical, Experimental, and Genomic Differences between Intermediately Pathogenic, Highly Pathogenic, and Epidemic Streptococcus suis|
C Ye, H Zheng, J Zhang, H Jing, L Wang, Y Xiong, W Wang, Z Zhou, ...
The Journal of infectious diseases 199 (1), 97-107, 2009
|Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe|
GL Kay, MJ Sergeant, Z Zhou, JZM Chan, A Millard, J Quick, I Szikossy, ...
Nature communications 6 (1), 1-9, 2015
|Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047|
Y Ren, Y Ren, Z Zhou, X Guo, Y Li, L Feng, L Wang
Journal of bacteriology 192 (9), 2463-2464, 2010
|Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using deep RNA sequencing|
J Xiong, X Lu, Z Zhou, Y Chang, D Yuan, M Tian, Z Zhou, L Wang, C Fu, ...
PloS one 7 (2), e30630, 2012
|Rates of mutation and host transmission for an Escherichia coli clone over 3 years|
PR Reeves, B Liu, Z Zhou, D Li, D Guo, Y Ren, C Clabots, R Lan, ...
PloS one 6 (10), e26907, 2011
|Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913|
QL Qin, Y Li, YJ Zhang, ZM Zhou, WX Zhang, XL Chen, XY Zhang, ...
The ISME journal 5 (2), 274-284, 2011
|Complete genome sequence of the probiotic Lactobacillus plantarum ST-III|
Y Wang, C Chen, L Ai, F Zhou, Z Zhou, L Wang, H Zhang, W Chen, B Guo
Journal of bacteriology 193 (1), 313-314, 2011
|Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitation|
L Wang, B Spira, Z Zhou, L Feng, RP Maharjan, X Li, F Li, C McKenzie, ...
Genome biology and evolution 2, 478-487, 2010
|Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona|
Z Zhou, A McCann, E Litrup, R Murphy, M Cormican, S Fanning, D Brown, ...
PLoS Genet 9 (4), e1003471, 2013
|Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever|
Z Zhou, A McCann, FX Weill, C Blin, S Nair, J Wain, G Dougan, ...
PNAS 111 (33), 12199-12204, 2014