Alan M Moses
TitleCited byYear
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337, 2009
12252009
In vivo enhancer analysis of human conserved non-coding sequences
LA Pennacchio, N Ahituv, AM Moses, S Prabhakar, MA Nobrega, ...
Nature 444 (7118), 499, 2006
10462006
Widespread discordance of gene trees with species tree in Drosophila: evidence for incomplete lineage sorting
DA Pollard, VN Iyer, AM Moses, MB Eisen
PLoS genetics 2 (10), e173, 2006
3242006
NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction
ANN Ba, A Pogoutse, N Provart, AM Moses
BMC bioinformatics 10 (1), 202, 2009
3192009
TreeFam: 2008 update
J Ruan, H Li, Z Chen, A Coghlan, LJM Coin, Y Guo, JK Heriche, Y Hu, ...
Nucleic acids research 36 (suppl_1), D735-D740, 2007
2672007
Large-scale turnover of functional transcription factor binding sites in Drosophila
AM Moses, DA Pollard, DA Nix, VN Iyer, XY Li, MD Biggin, MB Eisen
PLoS computational biology 2 (10), e130, 2006
2632006
Trait variation in yeast is defined by population history
J Warringer, E Zörgö, FA Cubillos, A Zia, A Gjuvsland, JT Simpson, ...
PLoS genetics 7 (6), e1002111, 2011
2522011
Conservation and evolution of cis-regulatory systems in ascomycete fungi
AP Gasch, AM Moses, DY Chiang, HB Fraser, M Berardini, MB Eisen
PLoS biology 2 (12), e398, 2004
2432004
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
A Haudry, AE Platts, E Vello, DR Hoen, M Leclercq, RJ Williamson, ...
Nature genetics 45 (8), 891, 2013
2312013
Revealing the genetic structure of a trait by sequencing a population under selection
L Parts, FA Cubillos, J Warringer, K Jain, F Salinas, SJ Bumpstead, ...
Genome research 21 (7), 1131-1138, 2011
2112011
A high-definition view of functional genetic variation from natural yeast genomes
A Bergström, JT Simpson, F Salinas, B Barré, L Parts, A Zia, ...
Molecular biology and evolution 31 (4), 872-888, 2014
1952014
MONKEY: identifying conserved transcription-factor binding sites in multiple alignments using a binding site-specific evolutionary model
AM Moses, DY Chiang, DA Pollard, VN Iyer, MB Eisen
Genome biology 5 (12), R98, 2004
1912004
Position specific variation in the rate of evolution in transcription factor binding sites
AM Moses, DY Chiang, M Kellis, ES Lander, MB Eisen
BMC evolutionary biology 3 (1), 19, 2003
1822003
Yeast proteome dynamics from single cell imaging and automated analysis
YT Chong, JLY Koh, H Friesen, SK Duffy, MJ Cox, A Moses, J Moffat, ...
Cell 161 (6), 1413-1424, 2015
1742015
Evidence for widespread adaptive evolution of gene expression in budding yeast
HB Fraser, AM Moses, EE Schadt
Proceedings of the National Academy of Sciences 107 (7), 2977-2982, 2010
1242010
Phylogenetic motif detection by expectation-maximization on evolutionary mixtures
AM Moses, DY Chiang, MB Eisen
Biocomputing 2004, 324-335, 2003
1202003
Proteome-wide discovery of evolutionary conserved sequences in disordered regions
ANN Ba, BJ Yeh, D Van Dyk, AR Davidson, BJ Andrews, EL Weiss, ...
Sci. Signal. 5 (215), rs1-rs1, 2012
812012
Clustering of phosphorylation site recognition motifs can be exploited to predict the targets of cyclin-dependent kinase
AM Moses, JK Hériché, R Durbin
Genome biology 8 (2), R23, 2007
812007
A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis
S Lumba, S Toh, LF Handfield, M Swan, R Liu, JY Youn, SR Cutler, ...
Developmental Cell 29 (3), 360-372, 2014
762014
Short linear motifs–ex nihilo evolution of protein regulation
NE Davey, MS Cyert, AM Moses
Cell Communication and Signaling 13 (1), 43, 2015
742015
The system can't perform the operation now. Try again later.
Articles 1–20