Zhihua Zhang
Zhihua Zhang
Verified email at big.ac.cn - Homepage
Title
Cited by
Cited by
Year
Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study
L Sun, Z Zhang, TL Bailey, AC Perkins, MR Tallack, Z Xu, H Liu
BMC bioinformatics 13 (1), 331, 2012
1092012
Positive selection for elevated gene expression noise in yeast
Z Zhang, W Qian, J Zhang
Molecular systems biology 5 (1), 2009
1012009
NPInter: the noncoding RNAs and protein related biomacromolecules interaction database
T Wu, J Wang, C Liu, Y Zhang, B Shi, X Zhu, Z Zhang, G SkogerbÝ, ...
Nucleic acids research 34 (suppl_1), D150-D152, 2006
942006
Evolution and migration history of the Chinese population inferred from Chinese Y-chromosome evidence
W Deng, B Shi, X He, Z Zhang, J Xu, B Li, J Yang, L Ling, C Dai, B Qiang, ...
Journal of human genetics 49 (7), 339-348, 2004
642004
Conservation analysis of small RNA genes in Escherichia coli
Y Zhang, Z Zhang, L Ling, B Shi, R Chen
Bioinformatics 20 (5), 599-603, 2004
512004
A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information
X Ma, A Kulkarni, Z Zhang, Z Xuan, R Serfling, MQ Zhang
Nucleic acids research 40 (7), e50-e50, 2012
452012
Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray
H He, L Cai, G SkogerbÝ, W Deng, T Liu, X Zhu, Y Wang, D Jia, Z Zhang, ...
Nucleic acids research 34 (10), 2976-2983, 2006
432006
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis
Y Zhang, S Li, G SkogerbÝ, Z Zhang, X Zhu, Z Zhang, S Sun, H Lu, B Shi, ...
BMC bioinformatics 7 (1), 252, 2006
422006
A big world inside small-world networks
Z Zhang, J Zhang
PloS one 4 (5), e5686, 2009
412009
Histone modification profiles are predictive for tissue/cell-type specific expression of both protein-coding and microRNA genes
Z Zhang, MQ Zhang
BMC bioinformatics 12 (1), 155, 2011
372011
Integrated analysis of multiple data sources reveals modular structure of biological networks
H Lu, B Shi, G Wu, Y Zhang, X Zhu, Z Zhang, C Liu, Y Zhao, T Wu, J Wang, ...
Biochemical and biophysical research communications 345 (1), 302-309, 2006
362006
Translational selection in human: more pronounced in housekeeping genes
L Ma, P Cui, J Zhu, Z Zhang, Z Zhang
Biology direct 9 (1), 17, 2014
322014
Identifying Hfq-binding small RNA targets in Escherichia coli
Y Zhang, S Sun, T Wu, J Wang, C Liu, L Chen, X Zhu, Y Zhao, Z Zhang, ...
Biochemical and biophysical research communications 343 (3), 950-955, 2006
312006
Decoding topologically associating domains with ultra-low resolution Hi-C data by graph structural entropy
A Li, X Yin, B Xu, D Wang, J Han, Y Wei, Y Deng, Y Xiong, Z Zhang
Nature communications 9 (1), 3265, 2018
232018
Computational identification of active enhancers in model organisms
C Wang, MQ Zhang, Z Zhang
Genomics, proteomics & bioinformatics 11 (3), 142-150, 2013
192013
Dynamic changes in subgraph preference profiles of crucial transcription factors
Z Zhang, C Liu, G SkogerbÝ, X Zhu, H Lu, L Chen, B Shi, Y Zhang, ...
PLoS computational biology 2 (5), e47, 2006
192006
Characteristic arrangement of nucleosomes is predictive of chromatin interactions at kilobase resolution
H Zhang, F Li, Y Jia, B Xu, Y Zhang, X Li, Z Zhang
Nucleic acids research 45 (22), 12739-12751, 2017
132017
Functional diversity of CTCFs is encoded in their binding motifs
R Fang, C Wang, G Skogerbo, Z Zhang
BMC genomics 16 (1), 649, 2015
122015
Phylogeny of SARS-CoV as inferred from complete genome comparison
Z Qi, Y Hu, W Li, Y Chen, Z Zhang, S Sun, H Lu, J Zhang, D Bu, L Ling, ...
Chinese Science Bulletin 48 (12), 1175-1178, 2003
122003
Delta: a new web-based 3D genome visualization and analysis platform
B Tang, F Li, J Li, W Zhao, Z Zhang
Bioinformatics 34 (8), 1409-1410, 2018
92018
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