Ehsan Ullah
Ehsan Ullah
Qatar Computing Research Institute
Verified email at hbku.edu.qa
TitleCited byYear
Assessment of network module identification across complex diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
Nature methods 16 (9), 843-852, 2019
23*2019
MC 3: a steady-state model and constraint consistency checker for biochemical networks
M Yousofshahi, E Ullah, R Stern, S Hassoun
BMC systems biology 7 (1), 129, 2013
142013
Selection Finder (SelFi): A computational metabolic engineering tool to enable directed evolution of enzymes
N Hassanpour, E Ullah, M Yousofshahi, NU Nair, S Hassoun
Metabolic Engineering Communications 4, 37-47, 2017
92017
An algorithm for identifying dominant-edge metabolic pathways
E Ullah, K Lee, S Hassoun
2009 IEEE/ACM International Conference on Computer-Aided Design-Digest of …, 2009
92009
Discovery of substrate cycles in large scale metabolic networks using hierarchical modularity
GV Sridharan, E Ullah, S Hassoun, K Lee
BMC systems biology 9 (1), 5, 2015
62015
An unsupervised disease module identification technique in biological networks using novel quality metric based on connectivity, conductance and modularity
R Mall, E Ullah, K Kunji, M Ceccarelli, H Bensmail
F1000Research 7 (378), 378, 2018
52018
gEFM: an algorithm for computing elementary flux modes using graph traversal
E Ullah, S Aeron, S Hassoun
IEEE/ACM Transactions on Computational Biology and Bioinformatics 13 (1 …, 2016
52016
Integrative 1H-NMR-based metabolomic profiling to identify type-2 diabetes biomarkers: An application to a population of Qatar
E Ullah, M Shahzad, R Rawi, M Dehbi, K Suhre, M Selim, D Mook, ...
Metabolomics 5 (1), 1000136, 2015
52015
Fourier-transform infrared imaging spectroscopy and Laser ablation-ICPMS new vistas for biochemical analyses of ischemic stroke in rat brain
M Ali, F Rakib, E M Abdelalim, R Mall, E Ullah, N Mesaeli, D McNaughton, ...
Frontiers in Neuroscience 12, 647, 2018
42018
Differential Community Detection in Paired Biological Networks
R Mall, E Ullah, K Kunji, F D'Angelo, H Bensmail, M Ceccarelli
Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017
42017
PreProPath: An uncertainty-aware algorithm for identifying predictable profitable pathways in biochemical networks
E Ullah, M Walker, K Lee, S Hassoun
IEEE/ACM transactions on computational biology and bioinformatics 12 (6 …, 2015
42015
Decomposing biochemical networks into elementary flux modes using graph traversal
E Ullah, C Hopkins, S Aeron, S Hassoun
Proceedings of the International Conference on Bioinformatics, Computational …, 2013
42013
Comparison and assessment of family-and population-based genotype imputation methods in large pedigrees
E Ullah, R Mall, MM Abbas, K Kunji, AQ Nato, H Bensmail, EM Wijsman, ...
Genome research 29 (1), 125-134, 2019
32019
Investigation of the effect of PD-L1 blockade on triple negative breast cancer cells using Fourier Transform Infrared Spectroscopy
MHM Ali, SM Toor, F Rakib, R Mall, E Ullah, K Mroue, PR Kolatkar, ...
Vaccines 7 (3), 109, 2019
22019
Application of FTIR and LA-ICPMS Spectroscopies as a Possible Approach for Biochemical Analyses of Different Rat Brain Regions
M HM Ali, F Rakib, V Nischwitz, E Ullah, R Mall, A Shraim, M Ahmad, ...
Applied Sciences 8 (12), 2436, 2018
22018
Harnessing Qatar Biobank to understand type 2 diabetes and obesity in adult Qataris from the First Qatar Biobank Project
E Ullah, R Mall, R Rawi, N Moustaid-Moussa, AA Butt, H Bensmail
Journal of translational medicine 16 (1), 99, 2018
22018
GIGI-Quick: a fast approach to impute missing genotypes in genome-wide association family data
K Kunji, E Ullah, AQ Nato Jr, EM Wijsman, M Saad
Bioinformatics 34 (9), 1591-1593, 2018
22018
An adaptive refinement for community detection methods for disease module identification in biological networks using novel metric based on connectivity, conductance & modularity
R Mall, E Ullah, K Kunji, H Bensmail, M Ceccarelli
2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017
22017
COUSCOus: improved protein contact prediction using an empirical Bayes covariance estimator
R Rawi, R Mall, K Kunji, M El Anbari, M Aupetit, E Ullah, H Bensmail
BMC bioinformatics 17 (1), 533, 2016
22016
A design study to identify inconsistencies in kinship information: The case of the 1000 Genomes project
M Aupetit, E Ullah, R Rawi, H Bensmail
2016 IEEE Pacific Visualization Symposium (PacificVis), 254-258, 2016
12016
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Articles 1–20