Yasuo Yoshikuni
Yasuo Yoshikuni
DOE Joint Genome Institute
Verified email at - Homepage
Cited by
Cited by
An engineered microbial platform for direct biofuel production from brown macroalgae
AJ Wargacki, E Leonard, MN Win, DD Regitsky, CNS Santos, PB Kim, ...
Science 335 (6066), 308-313, 2012
Designed divergent evolution of enzyme function
Y Yoshikuni, TE Ferrin, JD Keasling
Nature 440 (7087), 1078-1082, 2006
Efficient ethanol production from brown macroalgae sugars by a synthetic yeast platform
M Enquist-Newman, AME Faust, DD Bravo, CNS Santos, RM Raisner, ...
Nature 505 (7482), 239-243, 2014
Computational protein design enables a novel one-carbon assimilation pathway
JB Siegel, AL Smith, S Poust, AJ Wargacki, A Bar-Even, C Louw, ...
Proceedings of the National Academy of Sciences 112 (12), 3704-3709, 2015
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ...
Nature biotechnology 35 (7), 676-683, 2017
A Novel Semi-biosynthetic Route for Artemisinin Production Using Engineered Substrate-Promiscuous P450BM3
JA Dietrich, Y Yoshikuni, KJ Fisher, FX Woolard, D Ockey, DJ McPhee, ...
ACS chemical biology 4 (4), 261-267, 2009
Microbiome engineering: synthetic biology of plant-associated microbiomes in sustainable agriculture
J Ke, B Wang, Y Yoshikuni
Trends in Biotechnology 39 (3), 244-261, 2021
Mono and diterpene production in Escherichia coli
KK Reiling, Y Yoshikuni, VJJ Martin, J Newman, J Bohlmann, JD Keasling
Biotechnology and bioengineering 87 (2), 200-212, 2004
Genome-wide identification of bacterial plant colonization genes
BJ Cole, ME Feltcher, RJ Waters, KM Wetmore, TS Mucyn, EM Ryan, ...
PLoS Biology 15 (9), e2002860, 2017
Directed evolution of AraC for improved compatibility of arabinose-and lactose-inducible promoters
SK Lee, HH Chou, BF Pfleger, JD Newman, Y Yoshikuni, JD Keasling
Applied and environmental microbiology 73 (18), 5711-5715, 2007
The in vivo synthesis of plant sesquiterpenes by Escherichia coli
VJJ Martin, Y Yoshikuni, JD Keasling
Biotechnology and bioengineering 75 (5), 497-503, 2001
CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria
G Wang, Z Zhao, J Ke, Y Engel, YM Shi, D Robinson, K Bingol, Z Zhang, ...
Nature microbiology 4 (12), 2498-2510, 2019
Engineering cotton (+)-δ-cadinene synthase to an altered function: germacrene D-4-ol synthase
Y Yoshikuni, VJJ Martin, TE Ferrin, JD Keasling
Chemistry & biology 13 (1), 91-98, 2006
Biosynthesis of isopentenyl pyrophosphate
J Keasling, V Martin, D Pitera, SW Kim, ST Withers III, Y Yoshikuni, ...
US Patent 7,172,886, 2007
Validating genome-wide CRISPR-Cas9 function improves screening in the oleaginous yeast Yarrowia lipolytica
C Schwartz, JF Cheng, R Evans, CA Schwartz, JM Wagner, S Anglin, ...
Metabolic engineering 55, 102-110, 2019
Implementation of stable and complex biological systems through recombinase-assisted genome engineering
CNS Santos, DD Regitsky, Y Yoshikuni
Nature communications 4 (1), 2503, 2013
Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere
DFR Doud, RM Bowers, F Schulz, M De Raad, K Deng, A Tarver, ...
The ISME journal 14 (3), 659-675, 2020
Redesigning enzymes based on adaptive evolution for optimal function in synthetic metabolic pathways
Y Yoshikuni, JA Dietrich, FF Nowroozi, PC Babbitt, JD Keasling
Chemistry & biology 15 (6), 607-618, 2008
Ecosystem fabrication (EcoFAB) protocols for the construction of laboratory ecosystems designed to study plant-microbe interactions
J Gao, J Sasse, KM Lewald, K Zhalnina, LT Cornmesser, TA Duncombe, ...
JoVE (Journal of Visualized Experiments), e57170, 2018
Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes
J Huang, Z Yu, J Groom, JF Cheng, A Tarver, Y Yoshikuni, ...
The ISME Journal 13 (8), 2005-2017, 2019
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