William Stafford Noble
William Stafford Noble
Professor of Genome Sciences, University of Washington
Verified email at uw.edu - Homepage
TitleCited byYear
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
Nature 447 (7146), 799, 2007
47842007
MEME Suite: tools for motif discovery and searching
TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ...
Nucleic acids research 37 (suppl_2), W202-W208, 2009
40722009
Knowledge-based analysis of microarray gene expression data by using support vector machines
MPS Brown, WN Grundy, D Lin, N Cristianini, CW Sugnet, TS Furey, ...
Proceedings of the National Academy of Sciences 97 (1), 262-267, 2000
28902000
FIMO: scanning for occurrences of a given motif
CE Grant, TL Bailey, WS Noble
Bioinformatics 27 (7), 1017-1018, 2011
14772011
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137, 2005
14412005
The spectrum kernel: A string kernel for SVM protein classification
C Leslie, E Eskin, WS Noble
Biocomputing 2002, 564-575, 2001
12472001
Semi-supervised learning for peptide identification from shotgun proteomics datasets
L Käll, JD Canterbury, J Weston, WS Noble, MJ MacCoss
Nature methods 4 (11), 923, 2007
10932007
Quantifying similarity between motifs
S Gupta, JA Stamatoyannopoulos, TL Bailey, WS Noble
Genome biology 8 (2), R24, 2007
9922007
What is a support vector machine?
WS Noble
Nature biotechnology 24 (12), 1565, 2006
8492006
A three-dimensional model of the yeast genome
Z Duan, M Andronescu, K Schutz, S McIlwain, YJ Kim, C Lee, J Shendure, ...
Nature 465 (7296), 363, 2010
8022010
A statistical framework for genomic data fusion
GRG Lanckriet, T De Bie, N Cristianini, MI Jordan, WS Noble
Bioinformatics 20 (16), 2626-2635, 2004
7492004
Mismatch string kernels for discriminative protein classification
CS Leslie, E Eskin, A Cohen, J Weston, WS Noble
Bioinformatics 20 (4), 467-476, 2004
6662004
Kernel methods for predicting protein–protein interactions
A Ben-Hur, WS Noble
Bioinformatics 21 (suppl_1), i38-i46, 2005
6432005
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
6122012
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
JR Hesselberth, X Chen, Z Zhang, PJ Sabo, R Sandstrom, AP Reynolds, ...
Nature methods 6 (4), 283, 2009
5402009
Machine learning applications in genetics and genomics
MW Libbrecht, WS Noble
Nature Reviews Genetics 16 (6), 321, 2015
5272015
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases
L Käll, JD Storey, MJ MacCoss, WS Noble
Journal of proteome research 7 (01), 29-34, 2007
5262007
The MEME suite
TL Bailey, J Johnson, CE Grant, WS Noble
Nucleic acids research 43 (W1), W39-W49, 2015
4452015
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble
Nature methods 9 (5), 473, 2012
4292012
How does multiple testing correction work?
WS Noble
Nature biotechnology 27 (12), 1135, 2009
4212009
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