The ACE2 expression in human heart indicates new potential mechanism of heart injury among patients infected with SARS-CoV-2 L Chen, X Li, M Chen, Y Feng, C Xiong Cardiovascular research 116 (6), 1097-1100, 2020 | 1288 | 2020 |
The SARS-CoV-2 receptor ACE2 expression of maternal-fetal interface and fetal organs by single-cell transcriptome study M Li, L Chen, J Zhang, C Xiong, X Li PloS one 15 (4), e0230295, 2020 | 461 | 2020 |
SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network J Hu, X Li, K Coleman, A Schroeder, N Ma, DJ Irwin, EB Lee, ... Nature methods 18 (11), 1342-1351, 2021 | 320 | 2021 |
Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis X Li, K Wang, Y Lyu, H Pan, J Zhang, D Stambolian, K Susztak, MP Reilly, ... Nature communications 11 (1), 2338, 2020 | 294 | 2020 |
Iterative transfer learning with neural network for clustering and cell type classification in single-cell RNA-seq analysis J Hu, X Li, G Hu, Y Lyu, K Susztak, M Li Nature machine intelligence 2 (10), 607-618, 2020 | 91 | 2020 |
A joint deep learning model enables simultaneous batch effect correction, denoising, and clustering in single-cell transcriptomics J Lakkis, D Wang, Y Zhang, G Hu, K Wang, H Pan, L Ungar, MP Reilly, ... Genome research 31 (10), 1753-1766, 2021 | 45 | 2021 |
ScCAEs: deep clustering of single-cell RNA-seq via convolutional autoencoder embedding and soft K-means H Hu, Z Li, X Li, M Yu, X Pan Briefings in Bioinformatics 23 (1), bbab321, 2022 | 22 | 2022 |
Plasma testosterone and arrhythmic events in male patients with arrhythmogenic right ventricular cardiomyopathy J Ren, L Chen, N Zhang, X Chen, Q Zhao, K Chen, X Li, F Ruschitzka, ... ESC heart failure 7 (4), 1547-1559, 2020 | 18 | 2020 |
Single-cell transcriptomic identified HIF1A as a target for attenuating acute rejection after heart transplantation Y Chang, X Li, Q Cheng, Y Hu, X Chen, X Hua, X Fan, M Tao, J Song, ... Basic Research in Cardiology 116 (1), 64, 2021 | 16 | 2021 |
Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network J Hu, X Li, K Coleman, A Schroeder, DJ Irwin, EB Lee, RT Shinohara, M Li bioRxiv, 2020.11. 30.405118, 2020 | 14 | 2020 |
Batch alignment of single-cell transcriptomics data using deep metric learning X Yu, X Xu, J Zhang, X Li Nature communications 14 (1), 960, 2023 | 10 | 2023 |
The ACE2 expression of maternal-fetal interface and fetal organs indicates potential risk of vertical transmission of SARS-COV-2 M Li, L Chen, C Xiong, X Li | 10 | 2020 |
Novel risk prediction model to determine adverse heart failure outcomes in arrhythmogenic right ventricular cardiomyopathy S Chen, L Chen, AM Saguner, K Chen, D Akdis, A Gasperetti, ... Journal of the American Heart Association 11 (13), e024634, 2022 | 6 | 2022 |
Conditional quantile correlation screening procedure for ultrahigh-dimensional varying coefficient models X Li, X Ma, J Zhang Journal of Statistical Planning and Inference 197, 69-92, 2018 | 5 | 2018 |
Robust feature screening for varying coefficient models via quantile partial correlation XJ Li, XJ Ma, JX Zhang Metrika 80 (1), 17-49, 2017 | 5 | 2017 |
Propensity score matching enables batch-effect-corrected imputation in single-cell RNA-seq analysis X Xu, X Yu, G Hu, K Wang, J Zhang, X Li Briefings in Bioinformatics 23 (4), bbac275, 2022 | 4 | 2022 |
Regularization methods for high-dimensional sparse control function models X Xu, X Li, J Zhang Journal of Statistical Planning and Inference 206, 111-126, 2020 | 4 | 2020 |
Detailed analyses of the expression patterns of potential severe acute respiratory syndrome coronavirus 2 receptors in the human heart using single-nucleus RNA sequencing J Ren, Y Zhang, S Liu, X Li, X Sun Frontiers in Cardiovascular Medicine 8, 757362, 2021 | 2 | 2021 |
Sufficient dimension reduction and prediction through cumulative slicing PFC X Xu, X Li, J Zhang Journal of Statistical Computation and Simulation 88 (6), 1172-1190, 2018 | 1 | 2018 |
Structure-preserved dimension reduction using joint triplets sampling for multi-batch integration of single-cell transcriptomic data X Xu, X Li Briefings in Bioinformatics 24 (1), bbac608, 2023 | | 2023 |