| Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012 | 10067 | 2012 |
| Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform JJ Kozich, SL Westcott, NT Baxter, SK Highlander, PD Schloss Applied and environmental microbiology 79 (17), 5112-5120, 2013 | 6690 | 2013 |
| Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ... Genome research 21 (3), 494-504, 2011 | 3433 | 2011 |
| A framework for human microbiome research Nature 486 (7402), 215-221, 2012 | 2371* | 2012 |
| Gut microbiome-based metagenomic signature for non-invasive detection of advanced fibrosis in human nonalcoholic fatty liver disease R Loomba, V Seguritan, W Li, T Long, N Klitgord, A Bhatt, PS Dulai, ... Cell metabolism 25 (5), 1054-1062. e5, 2017 | 888 | 2017 |
| A catalog of reference genomes from the human microbiome Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ... Science 328 (5981), 994-999, 2010 | 834 | 2010 |
| Metagenomic pyrosequencing and microbial identification JF Petrosino, S Highlander, RA Luna, RA Gibbs, J Versalovic Clinical chemistry 55 (5), 856-866, 2009 | 783 | 2009 |
| Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome DM Saulnier, K Riehle, TA Mistretta, MA Diaz, D Mandal, S Raza, ... Gastroenterology 141 (5), 1782-1791, 2011 | 775 | 2011 |
| Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011 | 710 | 2011 |
| Genome project standards in a new era of sequencing PSG Chain, DV Grafham, RS Fulton, MG Fitzgerald, J Hostetler, D Muzny, ... Science 326 (5950), 236-237, 2009 | 472 | 2009 |
| Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF A Bourgogne, DA Garsin, X Qin, KV Singh, J Sillanpaa, S Yerrapragada, ... Genome biology 9, 1-16, 2008 | 316 | 2008 |
| Evaluation of 16S rDNA-based community profiling for human microbiome research Jumpstart Consortium Human Microbiome Project Data Generation Working Group PloS one 7 (6), e39315, 2012 | 314 | 2012 |
| Complete Genome Sequence of Rickettsia typhi and Comparison with Sequences of Other Rickettsiae MP McLeod, X Qin, SE Karpathy, J Gioia, SK Highlander, GE Fox, ... Journal of bacteriology 186 (17), 5842-5855, 2004 | 305 | 2004 |
| Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus SK Highlander, KG Hultén, X Qin, H Jiang, S Yerrapragada, EO Mason, ... BMC microbiology 7, 1-14, 2007 | 291 | 2007 |
| Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system PD Schloss, ML Jenior, CC Koumpouras, SL Westcott, SK Highlander PeerJ 4, e1869, 2016 | 248 | 2016 |
| Nivolumab plus ipilimumab with or without live bacterial supplementation in metastatic renal cell carcinoma: a randomized phase 1 trial N Dizman, L Meza, P Bergerot, M Alcantara, T Dorff, Y Lyou, P Frankel, ... Nature medicine 28 (4), 704-712, 2022 | 224 | 2022 |
| Library preparation methodology can influence genomic and functional predictions in human microbiome research MB Jones, SK Highlander, EL Anderson, W Li, M Dayrit, N Klitgord, ... Proceedings of the National Academy of Sciences 112 (45), 14024-14029, 2015 | 205 | 2015 |
| Host genetic control of the oral microbiome in health and disease A Gomez, JL Espinoza, DM Harkins, P Leong, R Saffery, M Bockmann, ... Cell host & microbe 22 (3), 269-278. e3, 2017 | 203 | 2017 |
| Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential CJ Yeoman, S Yildirim, SM Thomas, AS Durkin, M Torralba, G Sutton, ... PloS one 5 (8), e12411, 2010 | 183 | 2010 |
| Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes X Qin, JR Galloway-Peña, J Sillanpaa, JH Roh, SR Nallapareddy, ... BMC microbiology 12, 1-20, 2012 | 180 | 2012 |
