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Wenqiang Shi
Wenqiang Shi
Beijing Institute of Microbiology and Epidemiology
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JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
A Mathelier, O Fornes, DJ Arenillas, C Chen, G Denay, J Lee, W Shi, ...
Nucleic acids research 44 (D1), D110-D115, 2016
11052016
Large-scale comparative analyses of tick genomes elucidate their genetic diversity and vector capacities
N Jia, J Wang, W Shi, L Du, Y Sun, W Zhan, JF Jiang, Q Wang, B Zhang, ...
Cell 182 (5), 1328-1340. e13, 2020
1642020
Deep learning in omics: a survey and guideline
Z Zhang, Y Zhao, X Liao, W Shi, K Li, Q Zou, S Peng
Briefings in functional genomics 18 (1), 41-57, 2019
1462019
Genome-wide prediction of cis-regulatory regions using supervised deep learning methods
Y Li, W Shi, WW Wasserman
BMC bioinformatics 19, 1-14, 2018
1282018
Identification of altered cis-regulatory elements in human disease
A Mathelier, W Shi, WW Wasserman
Trends in Genetics 31 (2), 67-76, 2015
1242015
Epidemiology and ecology of severe fever with thrombocytopenia syndrome in China, 2010‒2018
D Miao, MJ Liu, YX Wang, X Ren, QB Lu, GP Zhao, K Dai, XL Li, H Li, ...
Clinical Infectious Diseases 73 (11), e3851-e3858, 2021
722021
Evaluating the impact of single nucleotide variants on transcription factor binding
W Shi, O Fornes, A Mathelier, WW Wasserman
Nucleic acids research 44 (21), 10106-10116, 2016
572016
Epidemiology and evolution of Middle East respiratory syndrome coronavirus, 2012-2020
AR Zhang, WQ Shi, K Liu, XL Li, MJ Liu, WH Zhang, GP Zhao, JJ Chen, ...
Infectious diseases of poverty 10 (03), 1-13, 2021
502021
YY1 binding association with sex-biased transcription revealed through X-linked transcript levels and allelic binding analyses
C Chen, W Shi, BP Balaton, AM Matthews, Y Li, DJ Arenillas, A Mathelier, ...
Scientific reports 6 (1), 37324, 2016
412016
Mapping the global potential transmission hotspots for severe fever with thrombocytopenia syndrome by machine learning methods
D Miao, K Dai, GP Zhao, XL Li, WQ Shi, JS Zhang, Y Yang, W Liu, ...
Emerging Microbes & Infections 9 (1), 817-826, 2020
342020
Epidemiological parameters of COVID-19 and its implication for infectivity among patients in China, 1 January to 11 February 2020
QB Lu, Y Zhang, MJ Liu, HY Zhang, N Jalali, AR Zhang, JC Li, H Zhao, ...
Eurosurveillance 25 (40), 2000250, 2020
332020
Meteorological conditions and nonpharmaceutical interventions jointly determined local transmissibility of COVID-19 in 41 Chinese cities: A retrospective observational study
LQ Fang, HY Zhang, H Zhao, TL Che, AR Zhang, MJ Liu, WQ Shi, JP Guo, ...
The Lancet Regional Health–Western Pacific 2, 2020
302020
Trafficked Malayan pangolins contain viral pathogens of humans
W Shi, M Shi, TC Que, XM Cui, RZ Ye, LY Xia, X Hou, JJ Zheng, N Jia, ...
Nature microbiology 7 (8), 1259-1269, 2022
272022
Metavirome of 31 tick species provides a compendium of 1,801 RNA virus genomes
XB Ni, XM Cui, JY Liu, RZ Ye, YQ Wu, JF Jiang, Y Sun, Q Wang, ...
Nature Microbiology 8 (1), 162-173, 2023
182023
Distribution and characteristics of Beilong virus among wild rodents and shrews in China
JJ Chen, XA Zhang, H Fan, FC Jiang, MZ Jin, K Dai, N Wang, PH Zhang, ...
Infection, Genetics and Evolution 85, 104454, 2020
142020
In-situ forming PEG-engineering hydrogels with anti-fouling characteristics as an artificial vitreous body
T Wang, J Deng, R Ran, W Shi, Y Gao, X Ren, J Cao, M Zhang
Chemical Engineering Journal 449, 137486, 2022
132022
Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants
W Shi, O Fornes, WW Wasserman
Bioinformatics 35 (15), 2610-2617, 2019
132019
Photo-induced specific intracellular release EGFR inhibitor from enzyme/ROS-dual sensitive nano-platforms for molecular targeted-photodynamic combinational therapy of non-small …
M Zhang, X Zhang, S Cai, H Mei, Y He, D Huang, W Shi, S Li, J Cao, B He
Journal of Materials Chemistry B 8 (35), 7931-7940, 2020
122020
Mitochondria-acting carrier-free nanoplatform self-assembled by α-tocopheryl succinate carrying cisplatin for combinational tumor therapy
H Mei, J Li, S Cai, X Zhang, W Shi, H Zhu, J Cao, B He
Regenerative Biomaterials 8 (4), rbab029, 2021
82021
Distribution of Dermacentor silvarum and Associated Pathogens: Meta-Analysis of Global Published Data and a Field Survey in China
WB Guo, WQ Shi, Q Wang, YS Pan, QC Chang, BG Jiang, JX Cheng, ...
International Journal of Environmental Research and Public Health 18 (9), 4430, 2021
82021
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