Michael C. Schatz
Michael C. Schatz
Bloomberg Distinguished Associate Professor, Johns Hopkins University
Verified email at cs.jhu.edu - Homepage
TitleCited byYear
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
18072007
The contribution of de novo coding mutations to autism spectrum disorder
I Iossifov, BJ O'Roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ...
Nature 515, 216-21, 2014
11592014
De novo gene disruptions in children on the autistic spectrum
I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ...
Neuron 74 (2), 285-299, 2012
11192012
Genome sequence of Aedes aegypti, a major arbovirus vector
V Nene, JR Wortman, D Lawson, B Haas, C Kodira, ZJ Tu, B Loftus, Z Xi, ...
Science 316 (5832), 1718-1723, 2007
10582007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ...
Nature, 991-996, 2008
9472008
A whole-genome assembly of the domestic cow, Bos taurus
AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ...
Genome biology 10 (4), R42, 2009
9412009
Hybrid error correction and de novo assembly of single-molecule sequencing reads
S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ...
Nature biotechnology 30 (7), 693, 2012
8152012
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ...
Science 315 (5809), 207-212, 2007
7942007
CloudBurst: highly sensitive read mapping with MapReduce
MC Schatz
Bioinformatics 25 (11), 1363-1369, 2009
7692009
Big data: astronomical or genomical?
ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ...
PLoS biology 13 (7), e1002195, 2015
7502015
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
6402012
Draft genome of the filarial nematode parasite Brugia malayi
E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ...
Science 317 (5845), 1756-1760, 2007
6042007
Quake: quality-aware detection and correction of sequencing errors
DR Kelley, MC Schatz, SL Salzberg
Genome biology 11 (11), R116, 2010
5792010
Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species
DE Fouts, EF Mongodin, RE Mandrell, WG Miller, DA Rasko, J Ravel, ...
PLoS biology 3 (1), e15, 2005
5712005
Searching for SNPs with cloud computing
B Langmead, MC Schatz, J Lin, M Pop, SL Salzberg
Genome biology 10 (11), R134, 2009
5472009
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 10, 2013
5302013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
4922011
Assembly of large genomes using second-generation sequencing
MC Schatz, AL Delcher, SL Salzberg
Genome research 20 (9), 1165-1173, 2010
4662010
Phased diploid genome assembly with single-molecule real-time sequencing
CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ...
Nature methods 13 (12), 1050, 2016
4382016
High-throughput sequence alignment using Graphics Processing Units
MC Schatz, C Trapnell, AL Delcher, A Varshney
BMC bioinformatics 8 (1), 474, 2007
3972007
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Articles 1–20