James P Noonan
James P Noonan
Associate Professor of Genetics, Yale School of Medicine
Verified email at yale.edu - Homepage
Title
Cited by
Cited by
Year
Sequencing and analysis of Neanderthal genomic DNA
JP Noonan, G Coop, S Kudaravalli, D Smith, J Krause, J Alessi, F Chen, ...
science 314 (5802), 1113-1118, 2006
6872006
Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism
AJ Willsey, SJ Sanders, M Li, S Dong, AT Tebbenkamp, RA Muhle, ...
Cell 155 (5), 997-1007, 2013
5882013
Genomic analysis of non-NF2 meningiomas reveals mutations in TRAF7, KLF4, AKT1, and SMO
VE Clark, EZ Erson-Omay, A Serin, J Yin, J Cotney, K Özduman, T Avşar, ...
Science 339 (6123), 1077-1080, 2013
4282013
Accelerated evolution of conserved noncoding sequences in humans
S Prabhakar, JP Noonan, S Pääbo, EM Rubin
Science 314 (5800), 786-786, 2006
4072006
Human-specific gain of function in a developmental enhancer
S Prabhakar, A Visel, JA Akiyama, M Shoukry, KD Lewis, A Holt, ...
Science 321 (5894), 1346-1350, 2008
3402008
Genomic sequencing of Pleistocene cave bears
JP Noonan, M Hofreiter, D Smith, JR Priest, N Rohland, G Rabeder, ...
Science 309 (5734), 597-599, 2005
2672005
Comparative DNA sequence analysis of mouse and human protocadherin gene clusters
Q Wu, T Zhang, JF Cheng, Y Kim, J Grimwood, J Schmutz, M Dickson, ...
Genome research 11 (3), 389-404, 2001
2542001
The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment
J Cotney, RA Muhle, SJ Sanders, L Liu, AJ Willsey, W Niu, W Liu, L Klei, ...
Nature Communications 6, 2015
1972015
Genomics of long-range regulatory elements
JP Noonan, AS McCallion
Annual review of genomics and human genetics 11, 1-23, 2010
1712010
The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb
J Cotney, J Leng, J Yin, SK Reilly, LE DeMare, D Emera, AE Ayoub, ...
Cell 154 (1), 185-196, 2013
1682013
The DNA helicase activity of BLM is necessary for the correction of the genomic instability of bloom syndrome cells
NF Neff, NA Ellis, TZ Ye, J Noonan, K Huang, M Sanz, M Proytcheva
Molecular biology of the cell 10 (3), 665-676, 1999
1511999
Evolutionary changes in promoter and enhancer activity during human corticogenesis
SK Reilly, J Yin, AE Ayoub, D Emera, J Leng, J Cotney, R Sarro, P Rakic, ...
Science 347 (6226), 1155-1159, 2015
1442015
Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb
J Cotney, J Leng, S Oh, LE DeMare, SK Reilly, MB Gerstein, JP Noonan
Genome Research 22 (6), 1069-1080, 2012
1232012
Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing
AE Ayoub, S Oh, Y Xie, J Leng, J Cotney, MH Dominguez, JP Noonan, ...
Proceedings of the National Academy of Sciences 108 (36), 14950-14955, 2011
1192011
The genomic landscape of cohesin-associated chromatin interactions
LE DeMare, J Leng, J Cotney, SK Reilly, J Yin, R Sarro, JP Noonan
Genome research 23 (8), 1224-1234, 2013
1162013
The DNA sequence and comparative analysis of human chromosome 5
J Schmutz, J Martin, A Terry, O Couronne, J Grimwood, S Lowry, ...
Nature 431 (7006), 268-274, 2004
1162004
Gene conversion and the evolution of protocadherin gene cluster diversity
JP Noonan, J Grimwood, J Schmutz, M Dickson, RM Myers
Genome research 14 (3), 354-366, 2004
1062004
Neanderthal genomics and the evolution of modern humans
JP Noonan
Genome research 20 (5), 547-553, 2010
922010
DAWN: A framework to identify autism genes and subnetworks using gene expression and genetics
L Liu, J Lei, SJ Sanders, AJ Willsey, Y Kou, AE Cicek, L Klei, C Lu, X He, ...
Molecular Autism 5 (1), 22, 2014
912014
Molecular and cellular reorganization of neural circuits in the human lineage
AMM Sousa, Y Zhu, MA Raghanti, RR Kitchen, M Onorati, ...
Science 358 (6366), 1027-1032, 2017
792017
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