Follow
James Carothers
Title
Cited by
Cited by
Year
Design of a dynamic sensor-regulator system for production of chemicals and fuels derived from fatty acids
F Zhang, JM Carothers, JD Keasling
Nature biotechnology 30 (4), 354-359, 2012
9122012
ECSIT is an evolutionarily conserved intermediate in the Toll/IL-1 signal transduction pathway
E Kopp, R Medzhitov, J Carothers, C Xiao, I Douglas, CA Janeway, ...
Genes & development 13 (16), 2059-2071, 1999
4171999
Informational complexity and functional activity of RNA structures
JM Carothers, SC Oestreich, JH Davis, JW Szostak
Journal of the American Chemical Society 126 (16), 5130-5137, 2004
2622004
Model-driven engineering of RNA devices to quantitatively program gene expression
JM Carothers, JA Goler, D Juminaga, JD Keasling
Science 334 (6063), 1716-1719, 2011
2182011
Measurement and modeling of intrinsic transcription terminators
G Cambray, JC Guimaraes, VK Mutalik, C Lam, QA Mai, T Thimmaiah, ...
Nucleic acids research 41 (9), 5139-5148, 2013
2122013
Digital logic circuits in yeast with CRISPR-dCas9 NOR gates
MW Gander, JD Vrana, WE Voje, JM Carothers, E Klavins
Nature communications 8 (1), 15459, 2017
2062017
Synthetic CRISPR-Cas gene activators for transcriptional reprogramming in bacteria
C Dong, J Fontana, A Patel, JM Carothers, JG Zalatan
Nature communications 9 (1), 1-11, 2018
1882018
Functional information and the emergence of biocomplexity
RM Hazen, PL Griffin, JM Carothers, JW Szostak
Proceedings of the National Academy of Sciences 104 (suppl_1), 8574-8581, 2007
1592007
Aptamers selected for higher-affinity binding are not more specific for the target ligand
JM Carothers, SC Oestreich, JW Szostak
Journal of the American Chemical Society 128 (24), 7929-7937, 2006
1422006
Chemical synthesis using synthetic biology
JM Carothers, JA Goler, JD Keasling
Current opinion in biotechnology 20 (4), 498-503, 2009
1182009
Data science: Accelerating innovation and discovery in chemical engineering
DAC Beck, JM Carothers, VR Subramanian, J Pfaendtner
AIChE Journal 62 (5), 1402-1416, 2016
1112016
Selecting RNA aptamers for synthetic biology: investigating magnesium dependence and predicting binding affinity
JM Carothers, JA Goler, Y Kapoor, L Lara, JD Keasling
Nucleic acids research 38 (8), 2736-2747, 2010
1112010
Solution structure of an informationally complex high-affinity RNA aptamer to GTP
JM Carothers, JH Davis, JJ Chou, JW Szostak
Rna 12 (4), 567-579, 2006
932006
Effective CRISPRa-mediated control of gene expression in bacteria must overcome strict target site requirements
J Fontana, C Dong, C Kiattisewee, VP Chavali, BI Tickman, JM Carothers, ...
Nature Communications 11 (1), 1618, 2020
752020
Designing RNA-based genetic control systems for efficient production from engineered metabolic pathways
JT Stevens, JM Carothers
ACS synthetic biology 4 (2), 107-115, 2015
642015
Regulated Expression of sgRNAs Tunes CRISPRi in E. coli
J Fontana, C Dong, JY Ham, JG Zalatan, JM Carothers
Biotechnology Journal 13 (9), 1800069, 2018
552018
Challenges and opportunities with CRISPR activation in bacteria for data-driven metabolic engineering
J Fontana, D Sparkman-Yager, JG Zalatan, JM Carothers
Current Opinion in Biotechnology 64, 190-198, 2020
362020
Portable bacterial CRISPR transcriptional activation enables metabolic engineering in Pseudomonas putida
C Kiattisewee, C Dong, J Fontana, W Sugianto, P Peralta-Yahya, ...
Metabolic engineering 66, 283-295, 2021
322021
Membrane augmented cell-free systems: a new frontier in biotechnology
NS Kruyer, W Sugianto, BI Tickman, D Alba Burbano, V Noireaux, ...
ACS Synthetic Biology 10 (4), 670-681, 2021
202021
Design-driven, multi-use research agendas to enable applied synthetic biology for global health
JM Carothers
Systems and synthetic biology 7, 79-86, 2013
192013
The system can't perform the operation now. Try again later.
Articles 1–20