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Zhu Xiaopeng
Zhu Xiaopeng
CTO, MyCellome LLC
Verified email at mycellome.com - Homepage
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Year
Topological structure analysis of the protein–protein interaction network in budding yeast
D Bu, Y Zhao, L Cai, H Xue, X Zhu, H Lu, J Zhang, S Sun, L Ling, N Zhang, ...
Nucleic acids research 31 (9), 2443-2450, 2003
9412003
Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids
G He, X Zhu, AA Elling, L Chen, X Wang, L Guo, M Liang, H He, H Zhang, ...
The Plant Cell 22 (1), 17-33, 2010
6092010
Evolutionarily conserved multisubunit RBL2/p130 and E2F4 protein complex represses human cell cycle-dependent genes in quiescence
L Litovchick, S Sadasivam, L Florens, X Zhu, SK Swanson, S Velmurugan, ...
Molecular cell 26 (4), 539-551, 2007
4492007
Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells
Y Tan, B Zhang, T Wu, G Skogerbø, X Zhu, X Guo, S He, R Chen
BMC molecular biology 10, 1-9, 2009
2322009
Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression
W Deng, X Zhu, G Skogerbø, Y Zhao, Z Fu, Y Wang, H He, L Cai, H Sun, ...
Genome research 16 (1), 20-29, 2006
1542006
Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs
J Chen, AA Shishkin, X Zhu, S Kadri, I Maza, M Guttman, JH Hanna, ...
Genome biology 17, 1-17, 2016
1522016
Model-based analysis of two-color arrays (MA2C)
JS Song, WE Johnson, X Zhu, X Zhang, W Li, AK Manrai, JS Liu, R Chen, ...
Genome biology 8, 1-13, 2007
1362007
NPInter: the noncoding RNAs and protein related biomacromolecules interaction database
T Wu, J Wang, C Liu, Y Zhang, B Shi, X Zhu, Z Zhang, G Skogerbø, ...
Nucleic acids research 34 (suppl_1), D150-D152, 2006
1102006
Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray
H He, J Wang, T Liu, XS Liu, T Li, Y Wang, Z Qian, H Zheng, X Zhu, T Wu, ...
Genome research 17 (10), 1471-1477, 2007
952007
MicroRNA-encoding long non-coding RNAs
S He, H Su, C Liu, G Skogerbø, H He, D He, X Zhu, T Liu, Y Zhao, R Chen
BMC genomics 9, 1-11, 2008
792008
Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication
W Wang, KN Klein, K Proesmans, H Yang, C Marchal, X Zhu, T Borrman, ...
Molecular cell 81 (14), 2975-2988. e6, 2021
662021
Accurate prediction of transposon-derived piRNAs by integrating various sequential and physicochemical features
L Luo, D Li, W Zhang, S Tu, X Zhu, G Tian
PloS one 11 (4), e0153268, 2016
642016
The interactome as a tree—an attempt to visualize the protein–protein interaction network in yeast
H Lu, X Zhu, H Liu, G Skogerbø, J Zhang, Y Zhang, L Cai, Y Zhao, S Sun, ...
Nucleic acids research 32 (16), 4804-4811, 2004
622004
Prediction of structured non‐coding RNAs in the genomes of the nematodes Caenorhabditis elegans and Caenorhabditis briggsae
K Missal, X Zhu, D Rose, W Deng, G Skogerbø, R Chen, PF Stadler
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2006
612006
Expression analysis of miRNAs and highly‐expressed small RNAs in two rice subspecies and their reciprocal hybrids
F Chen, G He, H He, W Chen, X Zhu, M Liang, L Chen, XW Deng
Journal of integrative plant biology 52 (11), 971-980, 2010
512010
Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray
H He, L Cai, G Skogerbø, W Deng, T Liu, X Zhu, Y Wang, D Jia, Z Zhang, ...
Nucleic acids research 34 (10), 2976-2983, 2006
482006
Phylophenetic properties of metabolic pathway topologies as revealed by global analysis
Y Zhang, S Li, G Skogerbø, Z Zhang, X Zhu, Z Zhang, S Sun, H Lu, B Shi, ...
BMC bioinformatics 7, 1-13, 2006
432006
Integrated analysis of multiple data sources reveals modular structure of biological networks
H Lu, B Shi, G Wu, Y Zhang, X Zhu, Z Zhang, C Liu, Y Zhao, T Wu, J Wang, ...
Biochemical and biophysical research communications 345 (1), 302-309, 2006
422006
Date of origin of the SARS coronavirus strains
H Lu, Y Zhao, J Zhang, Y Wang, W Li, X Zhu, S Sun, J Xu, L Ling, L Cai, ...
BMC Infectious Diseases 4, 1-6, 2004
332004
Identifying Hfq-binding small RNA targets in Escherichia coli
Y Zhang, S Sun, T Wu, J Wang, C Liu, L Chen, X Zhu, Y Zhao, Z Zhang, ...
Biochemical and biophysical research communications 343 (3), 950-955, 2006
322006
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