| Genotype-by-environment interaction and plasticity: exploring genomic responses of plants to the abiotic environment DL Des Marais, KM Hernandez, TE Juenger Annual Review of Ecology, Evolution, and Systematics 44, 5-29, 2013 | 433 | 2013 |
| Density of immunogenic antigens does not explain the presence or absence of the T-cell–inflamed tumor microenvironment in melanoma S Spranger, JJ Luke, R Bao, Y Zha, KM Hernandez, Y Li, AP Gajewski, ... Proceedings of the National Academy of Sciences 113 (48), E7759-E7768, 2016 | 378 | 2016 |
| Proteomics reveals NNMT as a master metabolic regulator of cancer-associated fibroblasts MA Eckert, F Coscia, A Chryplewicz, JW Chang, KM Hernandez, S Pan, ... Nature 569 (7758), 723-728, 2019 | 358 | 2019 |
| Genomics of ovarian cancer progression reveals diverse metastatic trajectories including intraepithelial metastasis to the fallopian tube MA Eckert, S Pan, KM Hernandez, RM Loth, J Andrade, SL Volchenboum, ... Cancer discovery 6 (12), 1342-1351, 2016 | 197 | 2016 |
| Before and after: comparison of legacy and harmonized TCGA genomic data commons’ data GF Gao, JS Parker, SM Reynolds, TC Silva, LB Wang, W Zhou, R Akbani, ... Cell systems 9 (1), 24-34. e10, 2019 | 133 | 2019 |
| GR and ER Coactivation Alters the Expression of Differentiation Genes and Associates with Improved ER+ Breast Cancer Outcome DC West, D Pan, EY Tonsing-Carter, KM Hernandez, CF Pierce, SC Styke, ... Molecular Cancer Research 14 (8), 707-719, 2016 | 96 | 2016 |
| Uniform genomic data analysis in the NCI Genomic Data Commons Z Zhang, K Hernandez, J Savage, S Li, D Miller, S Agrawal, F Ortuno, ... Nature communications 12 (1), 1226, 2021 | 86 | 2021 |
| The genetics of divergence and reproductive isolation between ecotypes of Panicum hallii DB Lowry, K Hernandez, SH Taylor, E Meyer, TL Logan, KW Barry, ... New Phytologist 205 (1), 402-414, 2015 | 76 | 2015 |
| The NCI genomic data commons AP Heath, V Ferretti, S Agrawal, M An, JC Angelakos, R Arya, R Bajari, ... Nature genetics 53 (3), 257-262, 2021 | 70 | 2021 |
| ACE2 and TMPRSS2 expression by clinical, HLA, immune, and microbial correlates across 34 human cancers and matched normal tissues: implications for SARS-CoV-2 COVID-19 R Bao, K Hernandez, L Huang, JJ Luke Journal for immunotherapy of cancer 8 (2), 2020 | 56 | 2020 |
| Glucocorticoid receptor modulation decreases ER-positive breast cancer cell proliferation and suppresses wild-type and mutant ER chromatin association E Tonsing-Carter, KM Hernandez, CR Kim, RV Harkless, A Oh, KR Bowie, ... Breast Cancer Research 21, 1-15, 2019 | 46 | 2019 |
| Genomics of ovarian cancer progression reveals diverse metastatic trajectories including intraepithelial metastasis to the fallopian tube. Cancer Discov. 2016; 6: 1342–1351 … MA Eckert, S Pan, KM Hernandez, RM Loth, J Andrade, SL Volchenboum, ... CD-16-0607.[Europe PMC free article][Abstract][CrossRef][Google Scholar], 0 | 44 | |
| Genetic Analysis of Impulsive Personality Traits: Examination of A Priori Candidates and Genome-wide Variation JC Gray, J MacKillop, J Weafer, KM Hernandez, J Gao, AA Palmer, ... Psychiatry Research, 2018 | 42 | 2018 |
| Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution SC McConnell, KM Hernandez, DJ Wcisel, RN Kettleborough, ... Proceedings of the National Academy of Sciences 113 (34), E5014-E5023, 2016 | 42 | 2016 |
| Integrative genomics reveals hypoxia inducible genes that are associated with a poor prognosis in neuroblastoma patients MA Applebaum, AR Jha, C Kao, KM Hernandez, G DeWane, HR Salwen, ... Oncotarget 7 (47), 76816, 2016 | 37 | 2016 |
| SARS-CoV-2 genomic diversity and the implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... Genome research 31 (4), 635-644, 2021 | 33 | 2021 |
| Quantitative trait loci associated with natural diversity in water-use efficiency and response to soil drying in Brachypodium distachyon DL Des Marais, S Razzaque, KM Hernandez, DF Garvin, TE Juenger Plant Science 251, 2-11, 2016 | 28 | 2016 |
| Accurate and rapid prediction of tuberculosis drug resistance from genome sequence data using traditional machine learning algorithms and CNN X Kuang, F Wang, KM Hernandez, Z Zhang, RL Grossman Scientific reports 12 (1), 2427, 2022 | 27 | 2022 |
| Immunogenomic determinants of tumor microenvironment correlate with superior survival in high-risk neuroblastoma R Bao, S Spranger, K Hernandez, Y Zha, P Pytel, JJ Luke, TF Gajewski, ... Journal for Immunotherapy of Cancer 9 (7), 2021 | 24 | 2021 |
| Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission N Sapoval, M Mahmoud, MD Jochum, Y Liu, RAL Elworth, Q Wang, ... BioRxiv, 2020 | 24 | 2020 |
Jorge Andrade, Ph.D.Executive Director and Global Head of Bioinformatics and Genomics at Kite Pharma, a Gilead companyVerified email at kitepharma.com
