Laurel Cooper

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	All	Since 2016
Citations	1069	752
h-index	16	13
i10-index	22	18

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Co-authors

Pankaj JaiswalProfessor, Oregon State UniversityVerified email at science.oregonstate.edu
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Elizabeth ArnaudBioversity InternationalVerified email at cgiar.org
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Eva HualaPhoenix BioinformaticsVerified email at phoenixbioinformatics.org
Naama MendaResearch Associate, Boyce Thompson Institute, Cornell UniversityVerified email at cornell.edu
Jaswinder SinghAssociate Professor, McGill UniversityVerified email at mcgill.ca
Sinisa TodorovicProfessor of Computer Science, Oregon State UniversityVerified email at oregonstate.edu
Daniel LangPlant Genome and Systems Biology, Helmholtz-Zentrum MünchenVerified email at helmholtz-muenchen.de
Ralf ReskiDistinguished Professor (Ordinarius) Plant Biotechnology, Faculty of Biology, University of FreiburgVerified email at biologie.uni-freiburg.de
Mary SchaefferGeneticist USDA ARS and adj professor University of MissouriVerified email at missouri.edu
Carolyn J. Lawrence-DillProfessor, Department of Agronomy and Department of Genetics, Development and Cell BiologyVerified email at iastate.edu
Luca MatteisSapienza University of RomeVerified email at di.uniroma1.it
Steven CannonUSDA-ARSVerified email at ars.usda.gov
Anika OellrichKing's College LondonVerified email at kcl.ac.uk
Robert HoehndorfKing Abdullah University of Science and TechnologyVerified email at kaust.edu.sa
Lukas A. MuellerBoyce Thompson Institute for Plant ResearchVerified email at cornell.edu
Jennifer KlingOregon State UniversityVerified email at oregonstate.edu
Barbara Lachenbruch and B. L. GartnerProfessor, Oregon State UniversityVerified email at oregonstate.edu
Jill WegrzynAssistant Professor in Ecology and Evolutionary Biology and Computational Biology Core DirectorVerified email at uconn.edu

Laurel Cooper

Oregon State University

Verified email at science.oregonstate.edu

plant genomics Ontologies data standards and interoperability plant anatomy and traits plant stress biology


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Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS Biol 13 (1), e1002033, 2015	173	2015
The plant ontology as a tool for comparative plant anatomy and genomic analyses L Cooper, RL Walls, J Elser, MA Gandolfo, DW Stevenson, B Smith, ... Plant and Cell Physiology 54 (2), e1-e1, 2013	126	2013
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics L Cooper, A Meier, MA Laporte, JL Elser, C Mungall, BT Sinn, D Cavaliere, ... Nucleic Acids Research 46 (D1), D1168-D1180, 2017	86	2017
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ... Database 2013, 2013	83	2013
Ontologies as integrative tools for plant science RL Walls, B Athreya, L Cooper, J Elser, MA Gandolfo, P Jaiswal, ... American journal of botany 99 (8), 1263-1275, 2012	80	2012
High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals J Singh, S Zhang, C Chen, L Cooper, P Bregitzer, A Sturbaum, PM Hayes, ... Plant molecular biology 62 (6), 937-950, 2006	55	2006
Mapping Ds insertions in barley using a sequence-based approach LD Cooper, L Marquez-Cedillo, J Singh, AK Sturbaum, S Zhang, ... Molecular Genetics and Genomics 272 (2), 181-193, 2004	48	2004
An ontology approach to comparative phenomics in plants A Oellrich, RL Walls, EKS Cannon, SB Cannon, L Cooper, J Gardiner, ... Plant methods 11 (1), 1-15, 2015	46	2015
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ... The Plant Journal 84 (1), 216-227, 2015	41	2015
Towards a reference plant trait ontology for modeling knowledge of plant traits and phenotypes E Arnaud, L Cooper, R Shrestha, N Menda, RT Nelson, L Matteis, ... International Conference on Knowledge Engineering and Ontology Development 2 …, 2012	38	2012
Application of Bruchin B to pea pods results in the up-regulation of CYP93C18, a putative isoflavone synthase gene, and an increase in the level of pisatin, an isoflavone … LD Cooper, RP Doss, R Price, K Peterson, JE Oliver Journal of experimental botany 56 (414), 1229-1237, 2005	36	2005
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR K Van Auken, P Fey, TZ Berardini, R Dodson, L Cooper, D Li, J Chan, Y Li, ... Database 2012, 2012	35	2012
Overview of the interactive task in BioCreative V Q Wang, S S Abdul, L Almeida, S Ananiadou, YI Balderas-Martínez, ... Database 2016, 2016	32	2016
The Plant Ontology: a Tool for Plant Genomics L Cooper, P Jaiswal Plant Bioinformatics, 89-114, 2016	30	2016
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ... Database 2018, 2018	24	2018
Emerging semantics to link phenotype and environment AE Thessen, DE Bunker, PL Buttigieg, LD Cooper, WM Dahdul, ... PeerJ 3, e1470, 2015	16	2015
Identification of quantitative trait loci for seed traits and floral morphology in a field‐grown Lolium perenne × Lolium multiflorum mapping population RN Brown, RE Barker, SE Warnke, LD Cooper, LA Brilman, MA Rouf Mian, ... Plant Breeding 129 (1), 29-34, 2010	16	2010
AISO: annotation of image segments with ontologies NT Lingutla, J Preece, S Todorovic, L Cooper, L Moore, P Jaiswal Journal of biomedical semantics 5 (1), 1-6, 2014	15	2014
Planteome: A Resource for Common Reference Ontologies and Applications for Plant Biology P Jaiswal, L Cooper, JL Elser, A Meier, MA Laporte, C Mungall, B Smith, ...	12	2016
Viability and bar expression are negatively correlated in Oregon Wolfe Barley Dominant hybrids P Bregitzer, LD Cooper, PM Hayes, PG Lemaux, J Singh, AK Sturbaum Plant biotechnology journal 5 (3), 381-388, 2007	12	2007

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