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Laurel Cooper
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The Gene Ontology resource: enriching a GOld mine
Nucleic acids research 49 (D1), D325-D334, 2021
13712021
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS biology 13 (1), e1002033, 2015
2032015
The plant ontology as a tool for comparative plant anatomy and genomic analyses
L Cooper, RL Walls, J Elser, MA Gandolfo, DW Stevenson, B Smith, ...
Plant and Cell Physiology 54 (2), e1-e1, 2013
1542013
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
L Cooper, A Meier, MA Laporte, JL Elser, C Mungall, BT Sinn, D Cavaliere, ...
Nucleic Acids Research 46 (D1), D1168-D1180, 2017
1372017
Ontologies as integrative tools for plant science
RL Walls, B Athreya, L Cooper, J Elser, MA Gandolfo, P Jaiswal, ...
American journal of botany 99 (8), 1263-1275, 2012
992012
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ...
Database 2013, 2013
892013
High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals
J Singh, S Zhang, C Chen, L Cooper, P Bregitzer, A Sturbaum, PM Hayes, ...
Plant molecular biology 62, 937-950, 2006
682006
Towards a Reference Plant Trait Ontology for Modeling Knowledge of Plant Traits and Phenotypes.
E Arnaud, L Cooper, R Shrestha, N Menda, RT Nelson, L Matteis, ...
KEOD, 220-225, 2012
542012
Mapping Ds insertions in barley using a sequence-based approach
LD Cooper, L Marquez-Cedillo, J Singh, AK Sturbaum, S Zhang, ...
Molecular Genetics and Genomics 272, 181-193, 2004
532004
An ontology approach to comparative phenomics in plants
A Oellrich, RL Walls, EKS Cannon, SB Cannon, L Cooper, J Gardiner, ...
Plant methods 11 (1), 1-15, 2015
522015
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, 2018
502018
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome
M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ...
The Plant Journal 84 (1), 216-227, 2015
412015
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR
K Van Auken, P Fey, TZ Berardini, R Dodson, L Cooper, D Li, J Chan, Y Li, ...
Database 2012, 2012
412012
Overview of the interactive task in BioCreative V
Q Wang, S S. Abdul, L Almeida, S Ananiadou, YI Balderas-Martínez, ...
Database 2016, baw119, 2016
382016
Application of Bruchin B to pea pods results in the up-regulation of CYP93C18, a putative isoflavone synthase gene, and an increase in the level of pisatin, an isoflavone …
LD Cooper, RP Doss, R Price, K Peterson, JE Oliver
Journal of experimental botany 56 (414), 1229-1237, 2005
372005
The Plant Ontology: a Tool for Plant Genomics
L Cooper, P Jaiswal
Plant Bioinformatics, 89-114, 2016
352016
The ontologies community of practice: a CGIAR initiative for big data in agrifood systems
E Arnaud, MA Laporte, S Kim, C Aubert, S Leonelli, B Miro, L Cooper, ...
Patterns 1 (7), 100105, 2020
342020
The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species
RL Walls*, L Cooper*, JL Elser, MA Gandolfo, CJ Mungall, B Smith, ...
Frontiers in Plant Science 10, 2019
272019
Developing data interoperability using standards: a wheat community use case
ED Yeumo, M Alaux, E Arnaud, S Aubin, U Baumann, P Buche, L Cooper, ...
F1000Research 6, 2017
232017
Emerging semantics to link phenotype and environment
AE Thessen, DE Bunker, PL Buttigieg, LD Cooper, WM Dahdul, ...
PeerJ 3, e1470, 2015
212015
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Articles 1–20