Vasilis J. Promponas
Vasilis J. Promponas
Assοciate Professor in Bioinformatics, University of Cyprus, Nicosia, Cyprus
Verified email at
Cited by
Cited by
Guidelines for the use and interpretation of assays for monitoring autophagy
DJ Klionsky, K Abdelmohsen, A Abe, MJ Abedin, H Abeliovich, ...
Autophagy 12 (1), 1-222, 2016
A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm
C Pasquier, VJ Promponas, GA Palaios, JS Hamodrakas, SJ Hamodrakas
Protein Engineering 12 (5), 381-385, 1999
CAST: an iterative algorithm for the complexity analysis of sequence tracts
VJ Promponas, AJ Enright, S Tsoka, DP Kreil, C Leroy, S Hamodrakas, ...
Bioinformatics 16 (10), 915-922, 2000
iLIR: a web resource for prediction of Atg8-family interacting proteins
I Kalvari, S Tsompanis, NC Mulakkal, R Osgood, T Johansen, IP Nezis, ...
Autophagy 10 (5), 2014
Evaluation of annotation strategies using an entire genome sequence
I Iliopoulos, S Tsoka, MA Andrade, AJ Enright, M Carroll, P Poullet, ...
Bioinformatics 19 (6), 717-726, 2003
Territorial dynamics of Mexican Ant‐thrushes Formicarius moniliger revealed by individual recognition of their songs
ANG Kirschel, ML Cody, ZT Harlow, VJ Promponas, EE Vallejo, CE Taylor
Ibis 153 (2), 255-268, 2011
PRED-GPCR: GPCR recognition and family classification server
PK Papasaikas, PG Bagos, ZI Litou, VJ Promponas, SJ Hamodrakas
Nucleic acids research 32 (suppl_2), W380-W382, 2004
iLIR database: A web resource for LIR motif-containing proteins in eukaryotes
AC Jacomin, S Samavedam, V Promponas, IP Nezis
Autophagy 12 (10), 1945-1953, 2016
PRED‐CLASS: Cascading neural networks for generalized protein classification and genome‐wide applications
C Pasquier, VJ Promponas, SJ Hamodrakas
Proteins: Structure, Function, and Bioinformatics 44 (3), 361-369, 2001
Clustering of biological time series by cepstral coefficients based distances
A Savvides, VJ Promponas, K Fokianos
Pattern Recognition 41 (7), 2398-2412, 2008
A web server to locate periodicities in a sequence
CM Pasquier, VI Promponas, NJ Varvayannis, SJ Hamodrakas
Bioinformatics (Oxford, England) 14 (8), 749-750, 1998
CoPreTHi: a Web tool which combines transmembrane protein segment prediction methods
VJ Promponas, GA Palaios, CM Pasquier, JS Hamodrakas, ...
In silico biology 1 (3), 159-162, 1999
Annotation inconsistencies beyond sequence similarity-based function prediction–phylogeny and genome structure
VJ Promponas, I Iliopoulos, CA Ouzounis
Standards in genomic sciences 10 (1), 108, 2015
Functional genomics evidence unearths new moonlighting roles of outer ring coat nucleoporins
KR Katsani, M Irimia, C Karapiperis, ZG Scouras, BJ Blencowe, ...
Scientific reports 4, 4655, 2014
Gene socialization: gene order, GC content and gene silencing in Salmonella
N Papanikolaou, K Trachana, T Theodosiou, VJ Promponas, I Iliopoulos
BMC genomics 10 (1), 1-10, 2009
Experimental evidence validating the computational inference of functional associations from gene fusion events: a critical survey
VJ Promponas, CA Ouzounis, I Iliopoulos
Briefings in Bioinformatics, 2012
BioTextQuest+: a knowledge integration platform for literature mining and concept discovery
N Papanikolaou, GA Pavlopoulos, E Pafilis, T Theodosiou, R Schneider, ...
Bioinformatics 30 (22), 3249-3256, 2014
Biological information extraction and co-occurrence analysis
GA Pavlopoulos, VJ Promponas, CA Ouzounis, I Iliopoulos
Biomedical Literature Mining, 77-92, 2014
FPGA-based hardware acceleration for local complexity analysis of massive genomic data
A Papadopoulos, I Kirmitzoglou, VJ Promponas, T Theocharides
Integration 46 (3), 230-239, 2013
Opportunities from the use of FPGAs as platforms for bioinformatics algorithms
G Chrysos, E Sotiriades, C Rousopoulos, A Dollas, A Papadopoulos, ...
2012 IEEE 12th International Conference on Bioinformatics & Bioengineering …, 2012
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